Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03340 ATGAGTCATGACCCTTATGTTCTTCATTCTGTTGTAAATTTTTTTTTTTTTCAGGTTCTAGCAAGCAGAACGAAGATTTATATCATATTGGAGTTCATTACAGGTGGTGAATTGTTCGATAAAATTATACATCATGGACGTCTTAGCGAGGCTGAAGCTAGAAGATATTTCCAACAGCTTATTGATGGCGTAGATTATTGCCACAGCAAGGGAGTCTATCACAGAGATTTGAAGCCAGAGAATCTTTTACTTGATTCACAAGGCAATATAAAAATTTCAGATTTTGGTTTAAGCGCATTACCAGAACAGGGTGTGAGTCTCCTTCGGACAACTTGTGGCACTCCAAACTATGTAGCCCCCGAGGTACTCAGTCACAAGGGTTACAATGGTGCTGTGGCAGATGTTTGGTCCTGTGGGGTTATCCTCTATGTCCTATTGGCTGGATACCTTCCCTTTGATGAGCTTGATCTAACCACCTTATACAGTAAGATTAATAAAGCAGACTTTTCATGCCCTTCTTGGTTTCCTGTAGGGGCAAAATCATTGATATGTAGAATTTTGGACACAAATCCTGAAACGCGTATAACCATAGAACAAATAAGAAACGATGAATGGTTTCAGAGGGGATACGTTCCAGTCAGCCTTCAGGAGCATGAAGATGTAAATCTGGATGACATAAATGCTGCTTTTGATGATGCCGAGGAAGAGAGAGATATTCGTCAAAGCCATAATGAGGACATGGGTCCCTTATTGCTTAATGCATTTGACTTGATCATTCTATCTCAAGGCTTAAACCTCGCATCAATGTTTGACAAGGGACAGGGCTCTCTTAAGCATCACACACGTTTTATATCTCAAAAGCCAGCAAAGGTGGTTTTATCAAGTATGGAAGTTGTGGCCCAATCAATGGGATTTAAGACGCATATTCGCAACTTTAAGATGAGAATAGAGGGTGTCTCAGCAAATAAAACATCTTTTTTCTCGGTTATTCTGGAGGTTTTTGAGGTGGCTCCCACATTTTATATGGTGGACATTCAGAATGCAGCTGGAGATGCTGGCGAATATCTCAATTTTTACAAGAGTTTTTGCGGCAATCTTGACGATATAATCTGGAAACCACCTCATGAAGCAAGCAAATCAAGGATCTCTAAGACTAAAAGCAAAAGGCGATAG 1173 0.4015 MSHDPYVLHSVVNFFFFQVLASRTKIYIILEFITGGELFDKIIHHGRLSEAEARRYFQQLIDGVDYCHSKGVYHRDLKPENLLLDSQGNIKISDFGLSALPEQGVSLLRTTCGTPNYVAPEVLSHKGYNGAVADVWSCGVILYVLLAGYLPFDELDLTTLYSKINKADFSCPSWFPVGAKSLICRILDTNPETRITIEQIRNDEWFQRGYVPVSLQEHEDVNLDDINAAFDDAEEERDIRQSHNEDMGPLLLNAFDLIILSQGLNLASMFDKGQGSLKHHTRFISQKPAKVVLSSMEVVAQSMGFKTHIRNFKMRIEGVSANKTSFFSVILEVFEVAPTFYMVDIQNAAGDAGEYLNFYKSFCGNLDDIIWKPPHEASKSRISKTKSKRR 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03340 390 Gene3D Kinase associated domain 1, KA1 251 372 - -
Aip07g03340 390 PANTHER - 16 387 - -
Aip07g03340 390 SMART serkin_6 6 206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g03340 390 ProSiteProfiles NAF domain profile. 247 271 IPR018451 GO:0007165
Aip07g03340 390 CDD CIPK_C 253 363 - -
Aip07g03340 390 SUPERFAMILY Protein kinase-like (PK-like) 17 223 IPR011009 -
Aip07g03340 390 Gene3D Transferase(Phosphotransferase) domain 1 6 250 - -
Aip07g03340 390 ProSitePatterns Serine/Threonine protein kinases active-site signature. 72 84 IPR008271 GO:0004672|GO:0006468
Aip07g03340 390 Pfam Protein kinase domain 17 206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g03340 390 Pfam NAF domain 250 307 IPR004041 GO:0007165
Aip07g03340 390 ProSiteProfiles Protein kinase domain profile. 1 206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g03340 390 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 16 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03340 Aip-Chr7 122778633 122782545 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03340 16 332 CBL-interacting serine-threonine protein kinases AT4G24400 79.495 0.0 536
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Aip07g03340 Pkinase 2.6e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03340 - - gmx:100813117 651.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03340 07 122778633 122782545 Aip07g03340 07 122778633 122782545 ECH