Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03331 ATGATGAAATTATCTTGGAAGAGAGATGATGGCACTTACCATGGAACAACATGGCAAATTAAGTTCAAGCTTCATAATGTTCAGAAAAATGGAACTTATAAACTGCGACTAGCACTTGCAGCCGTTAATTTCTCCGAATTACAGGTTAGAGTGAATAATCCAAAAGAAGATCCACCGATGTTTACAAGTGGGTTGATTGGGAAGGACAACGCCATAGCTAGACATGGAATTCATGGACTCTATAGACTATACAACATTGATTTATCATCTCATTTACTAGTCAAAGATGATAACATCATATATCTTACACAAACTATAGCTAATGGTCCCTTTCAAGGCATAATCCCCAAATCAAATCGAGGGAAAACGAAGGAAGAAGAATTGAAGCAGAGCTCAACGAACGATAACGACAACAAACTTCACTCAACTCTTCCAAATCCATTTCTCGATTTCTCATCACTTATCGTCCAATAA 474 0.3713 MMKLSWKRDDGTYHGTTWQIKFKLHNVQKNGTYKLRLALAAVNFSELQVRVNNPKEDPPMFTSGLIGKDNAIARHGIHGLYRLYNIDLSSHLLVKDDNIIYLTQTIANGPFQGIIPKSNRGKTKEEELKQSSTNDNDNKLHSTLPNPFLDFSSLIVQ 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03331 157 SUPERFAMILY Galactose-binding domain-like 14 114 IPR008979 -
Aip07g03331 157 Gene3D - 6 112 - -
Aip07g03331 157 PANTHER RHAMNOGALACTURONATE LYASE B-RELATED 4 115 - -
Aip07g03331 157 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 4 115 - -
Aip07g03331 157 Pfam Polysaccharide lyase family 4, domain III 9 115 IPR029411 -
Aip07g03331 157 MobiDBLite consensus disorder prediction 119 134 - -
Aip07g03331 157 MobiDBLite consensus disorder prediction 113 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03331 Aip-Chr7 122600244 122605547 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03331 7 115 Polysaccharide Lyase AT1G09890 57.798 2.53e-39 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03331 K18195 - fve:101298655 157.532