Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03318 ATGCGGCTCTCATGGGTTTCTAGCCGAGATAATTCAAGCGAAAGCAAATTGAGGGATCTCCTCGACAACTCGGAATACGTGCTTACCTTTGGGAGTCCTAACAGAAGGATCTTCTTGCCAGAGGATCTCTTGGACCGATCTGAGATCCCACCATACTTGAATGGAGAGGTGCCCGGAGATTATGGTTATAATCCTTTTGGTTTCATCAAGAAGCCAGAGGATTTTTCCAAGATTCTGGCTGAAGTTGAAAACCTTGCAGGATTCTGGCTGAAGTTGAAAACCTTATTGCTAATTGCTTTGGCATCCTACCTCGTTAAACTTCATGCAGAATGTAGTTAA 339 0.4395 MRLSWVSSRDNSSESKLRDLLDNSEYVLTFGSPNRRIFLPEDLLDRSEIPPYLNGEVPGDYGYNPFGFIKKPEDFSKILAEVENLAGFWLKLKTLLLIALASYLVKLHAECS 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03318 112 SUPERFAMILY Chlorophyll a-b binding protein 48 82 - -
Aip07g03318 112 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 27 98 IPR001344 GO:0009765|GO:0016020
Aip07g03318 112 Gene3D Chlorophyll a/b binding protein domain 37 95 - -
Aip07g03318 112 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 27 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03318 Aip-Chr7 122360233 122361497 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03318 32 112 Chloroplast and Mitochondria Gene Families AT4G10340 54.321 4.27e-20 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03318 K08916 - thj:104815606 87.4261