Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03317 ATGCCTCACAGAGCCACATACATTTTCCCGCGTCAATTTGGGGAGAGAGGGTTAGATGAGTCTTCGAAACAGCTATTGGATCACGAGAAGAAGAAGACACTTACCTCATGGGTCAAATCGGAACCATCCTTCGGGATCGAAAGCGACGCTACTTCCAAGAAGTCCAAAAACGACGTCGTTGAAGATGATGAAGATGTCGTTTACTCTAAAACCCACTCCGCGGTGTCGGAGCTCTTCACCGTCGTTGGTGGCCGCCGTGAGAATCTCCGGAATAAGCAAAAGCATGTCGCCGGTGCGTTCCGTGACTGGCTGATCGAGAGAAAAGGAGATCGCCGATCCAGTCATGATCACCGGAGGTTCTCGTTGTCCGAGGAAGAAGACGAGTGCGGGCTTCTGCTTCCTCCGTCGGCGGCGAAGGACAGTGCCGGTGGAGCATTGGACCAGAGTTTTGACCGGCAGGTGTCGCTTCCCAGAATGTCTAGCGGGAGCAGCTACGCCGGGAGCTTGTTCTCCGGGACGGCAACGGCGACGACGGTGGACGGGAATTTCTTGAGCGAGGTGGTGAAGGAGGAAACGACGTCGTCTTCGACGTCGAGTAGGAGGAGGAGGCAGCAGGAGGAGGTGGAGGAAGAAGATGAGAAAGAGAGGAGAGAGAAGGTTGCGGAGAAGTCGAAGGAGAGCTACATGCTGCAGGTGACAATGGCGAAGAGGCTCACTTGCTTGGCGAGTCTCGTGACTGAGCCCATTCTTGCTCCCACCACTGAGACATGGGATTCCGAATCCGTTTCCTATCGTCTATGGGTGAGTGGGTGTTTGTCATACTCAGACAAGATATCGGATGGATTTTACAACATACTGGGGATGAATCCGTACCTATGGGTGATGTGCAATGAGGGGGAGGAAGGGAAAAAGTTACCTAGTTTGATGGCGCTGAAGGCAATTGAACCCGGCGAGACGAGTATAGAGGTGGTTCTTGTTGATAGACAAGACGATTCTCGGTTGAAGGTACTTCAAGATAAAGCGCAGGAGTTGTATGGTGCTTCAGAGAATACTCTCGTGTTGGTTGAACAGCTTGGAAAACTTGTTGCCACATATATGGGGGGTACATATCCGGTGGAGCAAGGAGATCTGCACAAGCGGTGGAAGATGATCAGCAGGAGGTTGAGGAATTTTCACAAGTGTGTTGTTCTTCCGATAGGCAGCTTATCTACTGGGCTTTGTAGACATAGGGCCATTCTCTTCAAGAAATTGGCAGATTATATAGGTTTGCCATGCCGCATTGCTCGAGGTTGCAAGTATTGTGCTGCAGATCATAGATCCTCTTGCTTAGTCAAGTTCAAAGATGACAATCAGCTCTCAAGGGAATATGTAGTCGACCTGGTTGGGGAACCAGGAAATGTCCATGGGCCAGATTCCTCAATTAATGGAGCGTATCTTTCTTCAATGCCATCCCCATTTCAAATTTCTCATTTAAAAGAATCACAATCACCTTATATGGATGGCACAACATGTTCTCAATCTCCGAGTTCCAACCACATTTCTGTAATCCCTGAAAGTCATCCGTATTTAGGCTGTGAACAGGAAGATCAACAAATTAAAGAAGCTGAATTGCTAAAAAATCACAACAGCTCCATTTATTCTTCATTTGAGCAATCCCAAGAAGAAACAGTTCCACCTCCAATTCTTTTGGATTTAAACGAGAATAATAAGGCATGTGCAGTCCTGGACCCAATTTTGCCTTCCATCCATGAAGATGTTTCTAAAGCTCTTCATCCAGCTACTGAAGTAGCATTTCATGATTATGTTGGACTTGGCAAAGATGCAATTACTGTACAAGAAACTTACAAGAATGAGATCATTGTTACTGAAAGTTCTGTGGTAAAAACTAATTTTAAGCAATCTTTATTGTGCTCATCCAGCCAATCAGAACAGCTGCAGGTAGACAATGGAATCGAAAACCAGGGCTGTTTACCATCTGGGAATATTCCACGGTACCTGAATCTTGAGCCATCACTTGCAATGGACTGGCTTGAGATATCATGGGAGGAATTACGTATCAAAGAGCGTGTTGGTGCTGGCTCATTTGGGACAGTGCACCGTGCGGAATGGCATGGATCAGATGTTGCCGTCAAGGTTTTAACAGTTCAAGATTTCAGTGATGATAAATTAAAGGAGTTTCTGAGAGAGGTTGCAATAATGAAACGGGTTCGCCATCCAAATGTGGTGCTCTTCATGGGTGCTGTTACAAAACGCCCCCATCTATCAATAGTGACAGAATATTTGCAGAGAGGTAGTTTATACCGACTGATACATAAGCCAACAGCTGGTGAACATTTGGATAGCAGGAGAAGATTACGGATGGCTTTAGATGTGGCTAAAGGGATCAATTATCTTCATTGTCTAAAACCTCCTATCGTGCACTGGGATCTCAAATCTCCAAACTTGTTAGTGGACAAAAACTGGAACGTGAAGGTTTGCGATTTTGGGTTGTCTAGATTTAAGGCAAATACATTCATACCATCAAAGTCTGTTACTGGAACACCTGAATGGATGGCACCAGAGTTTCTCCGTGGAGAACCTTCAAATGAGAAATCTGATGTATACAGTTTTGGAGTTATCCTATGGGAGCTAGTAACCATGCAACAACCATGGATGGGACTTGGCCCTGCCCAGGTGGTTGGAGCTGTTGGTTTCCAGAATAGGAAGCTTGCCATTCCTCCAAATGTGTCCCCAGTATTGGTCTCCCTCATGGAATCTTGTTGGGCTGATGACCCCACCAAACGCCCAACTTTTGCTAGTATGGTTGTCTCGCTGAAGAAGCTGCTCAAGTCTCCAGCAGAGATGATAAAAATGGGCGAAACTTAA 2865 0.4642 MPHRATYIFPRQFGERGLDESSKQLLDHEKKKTLTSWVKSEPSFGIESDATSKKSKNDVVEDDEDVVYSKTHSAVSELFTVVGGRRENLRNKQKHVAGAFRDWLIERKGDRRSSHDHRRFSLSEEEDECGLLLPPSAAKDSAGGALDQSFDRQVSLPRMSSGSSYAGSLFSGTATATTVDGNFLSEVVKEETTSSSTSSRRRRQQEEVEEEDEKERREKVAEKSKESYMLQVTMAKRLTCLASLVTEPILAPTTETWDSESVSYRLWVSGCLSYSDKISDGFYNILGMNPYLWVMCNEGEEGKKLPSLMALKAIEPGETSIEVVLVDRQDDSRLKVLQDKAQELYGASENTLVLVEQLGKLVATYMGGTYPVEQGDLHKRWKMISRRLRNFHKCVVLPIGSLSTGLCRHRAILFKKLADYIGLPCRIARGCKYCAADHRSSCLVKFKDDNQLSREYVVDLVGEPGNVHGPDSSINGAYLSSMPSPFQISHLKESQSPYMDGTTCSQSPSSNHISVIPESHPYLGCEQEDQQIKEAELLKNHNSSIYSSFEQSQEETVPPPILLDLNENNKACAVLDPILPSIHEDVSKALHPATEVAFHDYVGLGKDAITVQETYKNEIIVTESSVVKTNFKQSLLCSSSQSEQLQVDNGIENQGCLPSGNIPRYLNLEPSLAMDWLEISWEELRIKERVGAGSFGTVHRAEWHGSDVAVKVLTVQDFSDDKLKEFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLQRGSLYRLIHKPTAGEHLDSRRRLRMALDVAKGINYLHCLKPPIVHWDLKSPNLLVDKNWNVKVCDFGLSRFKANTFIPSKSVTGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTMQQPWMGLGPAQVVGAVGFQNRKLAIPPNVSPVLVSLMESCWADDPTKRPTFASMVVSLKKLLKSPAEMIKMGET 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03317 954 PRINTS Tyrosine kinase catalytic domain signature 758 771 IPR001245 GO:0004672|GO:0006468
Aip07g03317 954 PRINTS Tyrosine kinase catalytic domain signature 799 817 IPR001245 GO:0004672|GO:0006468
Aip07g03317 954 PRINTS Tyrosine kinase catalytic domain signature 865 887 IPR001245 GO:0004672|GO:0006468
Aip07g03317 954 PRINTS Tyrosine kinase catalytic domain signature 909 931 IPR001245 GO:0004672|GO:0006468
Aip07g03317 954 MobiDBLite consensus disorder prediction 187 223 - -
Aip07g03317 954 Pfam Ethylene-responsive protein kinase Le-CTR1 259 467 - -
Aip07g03317 954 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 151 952 - -
Aip07g03317 954 ProSitePatterns Protein kinases ATP-binding region signature. 690 711 IPR017441 GO:0005524
Aip07g03317 954 SUPERFAMILY Protein kinase-like (PK-like) 662 934 IPR011009 -
Aip07g03317 954 ProSitePatterns Serine/Threonine protein kinases active-site signature. 805 817 IPR008271 GO:0004672|GO:0006468
Aip07g03317 954 SMART serkin_6 684 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g03317 954 Pfam Protein tyrosine and serine/threonine kinase 684 937 IPR001245 GO:0004672|GO:0006468
Aip07g03317 954 ProSiteProfiles Protein kinase domain profile. 684 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g03317 954 Gene3D Phosphorylase Kinase; domain 1 677 762 - -
Aip07g03317 954 MobiDBLite consensus disorder prediction 195 223 - -
Aip07g03317 954 PANTHER SERINE/THREONINE-PROTEIN KINASE CTR1-LIKE ISOFORM X1 151 952 - -
Aip07g03317 954 Gene3D Transferase(Phosphotransferase) domain 1 763 950 - -
Aip07g03317 954 Coils Coil 203 223 - -
Aip07g03317 954 CDD STKc_MAP3K-like 690 938 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03317 Aip-Chr7 122339562 122347130 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03317 1 952 MAP Kinase Kinase Kinase AT4G24480 55.859 0.0 1035
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Aip07g03317 PK_Tyr_Ser-Thr 4.6e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03317 - - adu:107461056 1783.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03317 07 122339562 122347130 Aip07g03317 07 122339562 122347130 ECH
Aip07g01732 07 36894969 36900551 Aip07g03317 07 122339562 122347130 PCT
Aip07g00419 07 3552779 3556884 Aip07g03317 07 122339562 122347130 PCT