Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03311 ATGCCGGAGAAGTCCAGGAAGGTACCTTTCACGGAACAAGACTCAGCAAAGCTCCTAGAAAGGTATGATGCAACGACGGTGTTAACTTTGCTTCAGGAACTTGCGCACTATCCTCACGCGAAGATCGATTGGAATGAGTTGGTGAAGAATACATCAACTGGCATTTCCACCGCCAGAGAGTATCAGATGGTGTGGCGCCACTTGGCCTACCGTCATGCCCTTGCTGAAAATCTTGAAGATGGTGCTCAACCTCTGGATGATGATAGTGACCTAGAGTGCGAGCTGGAAGTATCGCCTCCAGTAAGTGCTGAAGCTGTGTCAGAGGCTGCAGCATGTATGAAGGTAATGATTGCTTCTCGTACGCTGAGTGAATCAACCCCTAGTAGCTCAACGATTGAGGCTCCATTGACTATAACTGTTCCGGTTTGCCGTGGATCTGGAACTCCTAGTGGAAGTTCACAATCATCTAAATTGATGCAAGGGATGAATGTTATTTTTCCGGTTACTGTTCAGAGACAAACACTGCCAACTGCACCATCAACAGATGGTGTTGAGACCAAGGGATTAGGTGGTGGCAACATGGCTTCCAAAAGGAAGAGAAAAGCATGGTCAGAGGAAGAGGACATCCAGTTACGAGCAGCTGTTCAGAGATTTGGTGAAGGAAATTGGGCTAACATGGCCAAAGGAGATAACTTTCCTATTAAGAGAAGTCCTACTCAATTGGCTCAGAGGTGGAGCATTTTAAGAAAGAAAGATGGAACTGCCAATTCGGGAACCATCGTGACCAGCACAACTTATACTACTGCCGAACAACTGGCAACTCGTCATTCATTATCTTTAGCCCTTGATATGCCATTCAAGAAGTTAACTGCTCCTGGAACTGCTGATCAAGCTAAGACATCCTTAACAAGTAAAACTCAAGTGCAGCATAACGCTACAGCAACAACAATACAAAGTAGTTTACCACCACATCAGCAATCAATGCTCAGAGGTAATCCAACTCCAAATCCTGCATTGAAAGCTACTGCAGTTGCTGTTGGTGCCAGAGTTGTTTCTCAGTCAAACATTGCATCACAAATAAAGGTTGCACAAGCAAGAAATGCTGTGCCTGGAACAAGTATTTCATTGGCAAAACCATCCACTTCTGCTGGTATGTCTTCCGAATCGGAGGTACAAGCTCGCACTAGTTCAAGTGTTGCACATGTTCCCCCTCAGTCTGTACGCATTCCATCTCAGTCTGCACCTGCACCCTCCCAGTCAACTGCTCCTATCACATCTCCGTCATCGTGCTCTAGTACCGTTAAAGCCGCCTCTTCTACGGTGCCTGTATTGCCTGAGAAGGACAAACCCGTTACCCCTGTGGTTAACAAAGTTCCAATAAAGCAAGAAGTTAATACTACAGATGAATTGCGAAATTCAAAGCCTAGCCCGGCACCAAAAGAGATGGTTCAAAATGATGAGAAATCAACTCAAGACAAGAGCATGAATATTCCCGTTAAAGAGAGGGTTACTTCTCTTGTGGGAAGTACAAGAAAGGAGGAAGTAGCAGAAGATAAAGCAGTGCCAAAAAATCAAGTCAAGTCTGAAGATGATGGAAACAAGGGGAGCCATGATTTAGATAAAGAAAAGAGCAAAATTTCAATTAATGGAAGATCTCAGGATCAAAAGATGGATGAGAAGCAAGAAAATTTGCAGAACTAG 1701 0.4462 MPEKSRKVPFTEQDSAKLLERYDATTVLTLLQELAHYPHAKIDWNELVKNTSTGISTAREYQMVWRHLAYRHALAENLEDGAQPLDDDSDLECELEVSPPVSAEAVSEAAACMKVMIASRTLSESTPSSSTIEAPLTITVPVCRGSGTPSGSSQSSKLMQGMNVIFPVTVQRQTLPTAPSTDGVETKGLGGGNMASKRKRKAWSEEEDIQLRAAVQRFGEGNWANMAKGDNFPIKRSPTQLAQRWSILRKKDGTANSGTIVTSTTYTTAEQLATRHSLSLALDMPFKKLTAPGTADQAKTSLTSKTQVQHNATATTIQSSLPPHQQSMLRGNPTPNPALKATAVAVGARVVSQSNIASQIKVAQARNAVPGTSISLAKPSTSAGMSSESEVQARTSSSVAHVPPQSVRIPSQSAPAPSQSTAPITSPSSCSSTVKAASSTVPVLPEKDKPVTPVVNKVPIKQEVNTTDELRNSKPSPAPKEMVQNDEKSTQDKSMNIPVKERVTSLVGSTRKEEVAEDKAVPKNQVKSEDDGNKGSHDLDKEKSKISINGRSQDQKMDEKQENLQN 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03311 566 MobiDBLite consensus disorder prediction 459 473 - -
Aip07g03311 566 MobiDBLite consensus disorder prediction 506 566 - -
Aip07g03311 566 ProSiteProfiles Myb-like domain profile. 195 249 IPR001005 -
Aip07g03311 566 MobiDBLite consensus disorder prediction 296 336 - -
Aip07g03311 566 CDD SANT_TRF 201 250 - -
Aip07g03311 566 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 2 564 - -
Aip07g03311 566 MobiDBLite consensus disorder prediction 296 333 - -
Aip07g03311 566 MobiDBLite consensus disorder prediction 373 433 - -
Aip07g03311 566 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 2 564 - -
Aip07g03311 566 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 195 253 IPR017930 -
Aip07g03311 566 Pfam Myb-like DNA-binding domain 200 245 IPR001005 -
Aip07g03311 566 SUPERFAMILY Homeodomain-like 198 251 IPR009057 -
Aip07g03311 566 SMART sant 199 251 IPR001005 -
Aip07g03311 566 MobiDBLite consensus disorder prediction 176 201 - -
Aip07g03311 566 MobiDBLite consensus disorder prediction 456 566 - -
Aip07g03311 566 Gene3D - 193 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03311 Aip-Chr7 122251606 122256814 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aip07g03311 Myb_DNA-binding 2.1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03311 - - adu:107460964 952.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03311 07 122251606 122256814 Aip07g03311 07 122251606 122256814 ECH