Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03310 ATGACAATTCCAGAAAAGAAACCCAACAAATTAGTGCCTTTCACGGAACAAGACGCTGCTAGAATCGCACAAAGGTACGATGCAACGACGGTGTTAACCTTACTTCAGGAGGTGGCTCAGGCTCAGTGTCCGAACGCAAAAATTGATTGGAATGAATTGGTGAAGAGAACCTCAACTGGGATCTCTAATGCCAGGGAGTATCAGATGCTGTGGCGGCATTTAGCCTACGGTCATGCCCTTGTCGACAATCTCGAAAATGGCGCGGAACCTCTGGATGATGATAGTGACCTAGAATATGAGGTTGAAGCATTACCCCCAATAAGTCCGGAAGTAGCATCAGAGACTGTGGCATGTGTGAAGGTAATGATTGCTTCACTAAGTGAATCAACACCTAGTAGTTCAACAATTGAGGCTCCACTGACTATACATGCTCCAGTTTGCAATTCATCTAAAACTTCTAACAAGGGCTCACAATCCTCTAGTTTGATGCAAGGAACAGAGATTATTTTTCCGGTTACTATTAAGAGACAGACACTGCCAGCTGTATCATTGACAGATAATATTGAAAGCAAGGGATTAGATGGTAGCAACATGGCTTCCAAAAAGAGGAAAACAGCATGGTCAGAGGAAGAGGACAATCTGCTACGAGATGCTGTTCAAAGATTTGGTGAAGGGCATTGGGCTACCATTGCAAAAGGAGGCAACTTTCCTGTTAAGAGAACTGCTAAACAGATATATCAAAGGTGGAACTTTTTGCAAAAGAAAGATGACAGTACCAATTCAGGACCCATCTTGACCAGCACGCGTTATGATACTGCTGAACAACAAGCAACTCGTCACTCATTATCTTTAGCCCTTGATATGCCATTAAAAAAGTTAACTGCTCCCGGAATGACCAGTAGGAAAACCTTGAATATGTCAGGTAAAAATTTGTTGCAGCATGTTGCTACAGAGTCTTCACCGCTTCATGGTCATGTTGTACCACCTCAGCATCCTTCTCAAGGGTCTTTTGTGGGGTCTTGTAGTTCCTCACTGAAATCTACATTAGTTCCTGAAAAACCATTGCTGGAAGTTCATCCAACTCTTAACGGTACAGTAAAAGGTGCCACCATAGTTTCTGGTGCCCAAATAGTTTCAACGTCAGATTCTGGATCACAAGTAAAGGTTTCACATAGAAATGTGGTTGCTACAACAAGTAGTTGTTTGGCAAAGTCATCAACTCCTGCGTCATTGCCTCCGGAATCAAAGGTACAATTTCAAACAGATCCGAGTTCAGCACCTGTTTGCACCCAATCAACTGTTGTACTTGCATGTCCTGCATCATGCATTAAGCCAGCTAAAGCTTCCTCTTTGACAATGGAGAAGTCGCCTGAACAGGAAAAACATGATAACTCTGTCGTTTATAAAGCTCCAACAAAGCAAGAAGTTAGAGTTTCTAATCTTAGCCCTCTCAAAGAAGATAAGACCATAGTAATGGAAATTACAAGTAAGGAAGTAATAGAAGATAAAATGATAATAAAAAATCAAGTGGGAATAAATCAGGGAACTGCTAAGGATACAAATTTAAAATGA 1572 0.416 MTIPEKKPNKLVPFTEQDAARIAQRYDATTVLTLLQEVAQAQCPNAKIDWNELVKRTSTGISNAREYQMLWRHLAYGHALVDNLENGAEPLDDDSDLEYEVEALPPISPEVASETVACVKVMIASLSESTPSSSTIEAPLTIHAPVCNSSKTSNKGSQSSSLMQGTEIIFPVTIKRQTLPAVSLTDNIESKGLDGSNMASKKRKTAWSEEEDNLLRDAVQRFGEGHWATIAKGGNFPVKRTAKQIYQRWNFLQKKDDSTNSGPILTSTRYDTAEQQATRHSLSLALDMPLKKLTAPGMTSRKTLNMSGKNLLQHVATESSPLHGHVVPPQHPSQGSFVGSCSSSLKSTLVPEKPLLEVHPTLNGTVKGATIVSGAQIVSTSDSGSQVKVSHRNVVATTSSCLAKSSTPASLPPESKVQFQTDPSSAPVCTQSTVVLACPASCIKPAKASSLTMEKSPEQEKHDNSVVYKAPTKQEVRVSNLSPLKEDKTIVMEITSKEVIEDKMIIKNQVGINQGTAKDTNLK 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03310 523 Gene3D - 196 260 - -
Aip07g03310 523 ProSiteProfiles Myb-like domain profile. 199 253 IPR001005 -
Aip07g03310 523 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 7 501 - -
Aip07g03310 523 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 199 257 IPR017930 -
Aip07g03310 523 CDD SANT_TRF 207 249 - -
Aip07g03310 523 SMART sant 203 255 IPR001005 -
Aip07g03310 523 Pfam Myb-like DNA-binding domain 205 250 IPR001005 -
Aip07g03310 523 SUPERFAMILY Homeodomain-like 202 255 IPR009057 -
Aip07g03310 523 MobiDBLite consensus disorder prediction 454 468 - -
Aip07g03310 523 MobiDBLite consensus disorder prediction 452 471 - -
Aip07g03310 523 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 7 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03310 Aip-Chr7 122235600 122239079 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aip07g03310 Myb_DNA-binding 1.2e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03310 - - aip:107606216 1008.44