Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03303 ATGGCCTACACAGGTTCAATGCAGTTGCCTCGTGAAATTAGGCTACACAGTAATAGTGGGATCTGTAGTTTCCATAATAATCCAATAGGTATTGGGCGATTACATTTGGTTACCATAAATATTTCACCACGCAGTTGGAAGCAGAATTCTTCAGCACGCCATCTTTTCAATAAAGTACACGCCCCAATAAGACATGTGCCTTCCAGATGTAAAGTTTTCATATGTAGGTCTGTCCTAATACCAGGTGGAGGGAGTGGGACTCCACTCATGAAATCTGCTGCTGTATTTTTAACAAGGTCGCAGGAGACTTTAAGTGGGAACCCTGTTTTGCTTCGATTGATCCCAGCACTTGGTATCATTGCCTTTGCTGTTTGTGGCCTTGAACCACTCATACGTCTTGGCAGAGTTCTTATTCTTCAAAGACCTGACAGTACTTGGAAGAAAAGTAGCTCCAGATATATCATGACATCTTACTTCCAGCCCTTGCTATTGTGGACTGGGGCAATGCTCATATGCAGGGCACTAGATCCACTTGTCCTACCATCTGAGGCTAGCCAGGCTGTGAAGCAACGGATGCTGAATTTTGTGAGATCTTTGTCAACAGTGATTTCATTTGCTTACTGTTTATCAAGCTTTATTCAACAAGCACAAAAATTCTTTATGGAGGCAAATGACTCCAGTGATTCAAGAAATGTATCTGTATATACTGCTGTATGGGTTGCTGCAGTGTCACTGTTCATGGAGTTGCTAGGTTTCTCCACACAGAGGTGGTTAACTGCTGGTGGTTTGGGCACAGTATTGCTCACTCTTGCAGGTCGCGAGATATTCACAAACTTCTTGTCGAGTATAATGATCCATGCAACTCGGCCGTTTATTATGAATGAGTGGATTCAAACGAAGATTGAAGGATATGAGGTTTCTGGTACAGTTGAGCATGTAGGATGGTGGTCACCAACAATTGTGAGAGGTGATGATCGGGAAGCAGTTCATATTCCCAATCATAAGTTCACTGTAAATGTTGTGAGAAATCTGACTCAGAAATCCCATTGGCGCATCAAGAGCTACATTGCTATCAGTCACTTGGATGTTAACAAAATTAATAATATTGTAGCTGATATGCGGAAGGTTTTGGCCAAAAATCCTCAAGTAGAGCAACAAAAGTTGCATAGAAGGGTGTTTCTGGAGAATGTCAATCCGGAAAATCAGGCTCTTATGATATTAATATCTTGCTTTGTGAAAACTTCACATTTTGAAGAGTACCTCTGTGTTAAGGAGGCAATTCTCTTGGATCTTCTTAGAGTTGTCACTCACCATCGAGCTCGGCTAGCCACTCCCATCCGTACAGTTCAGAAAATATACAGTGAGGCTGACTCGGAAAATATACCTTTTGGGGACACTATTTTCACTCGATCCAGAGCAGCAGGAAATCGCCCATACCTCCTTATAGAACCGCCATATAAAGTTAATGGTGAGGATAAACCTAAACCTTCAGCTCGTTCGACTCGTCCAAATGAGGAAAAAGATGCCAAAGTTGATGAAACCTTGATGTCTGACCCCAAAGGAGATGAGAATTCAGTGGTGACATCAACCACCTCACCTGGTGTAAGCTCCAAGGATAAATCCAAGACAGCTTCTGAAGCCCAGAGTCAGAATCTGGGTTCTAATGGTTCAGTTGAGAAGACCTCCAAAACCTTGCAGCCCAAAAAGGAAAATGCAAATGCAGGAAAGGGAGCAACAGTTCCCCTATCGAAAAACCTTGCACAAAGTGCTGTGCCCGAAACTTCTCCGGTGACTTCACATGAGTCTAGCAAAGGAGAGACAACTTCTGCTAGTCCTTCACCGTTGAAGCAAGATGAAGAGAAATCTGCTGTGTCCTCACCTTCAATTAGGCCTTCCTTGGAAGATAATATCCTCCTTGGTGTTGCTCTCGAAGGTTCAAAACGAACTCTACCGATCGAGGAAGAAATGACTCCCCTTCCTATCCCTGGAGAGTCGCAAGAATTTGCTGTCCAAAGGAATGGGAGTGGACCTCCTGCTACCAAGGATAAGAAGGATCCTAAGCAGAATGATTAG 2073 0.4337 MAYTGSMQLPREIRLHSNSGICSFHNNPIGIGRLHLVTINISPRSWKQNSSARHLFNKVHAPIRHVPSRCKVFICRSVLIPGGGSGTPLMKSAAVFLTRSQETLSGNPVLLRLIPALGIIAFAVCGLEPLIRLGRVLILQRPDSTWKKSSSRYIMTSYFQPLLLWTGAMLICRALDPLVLPSEASQAVKQRMLNFVRSLSTVISFAYCLSSFIQQAQKFFMEANDSSDSRNVSVYTAVWVAAVSLFMELLGFSTQRWLTAGGLGTVLLTLAGREIFTNFLSSIMIHATRPFIMNEWIQTKIEGYEVSGTVEHVGWWSPTIVRGDDREAVHIPNHKFTVNVVRNLTQKSHWRIKSYIAISHLDVNKINNIVADMRKVLAKNPQVEQQKLHRRVFLENVNPENQALMILISCFVKTSHFEEYLCVKEAILLDLLRVVTHHRARLATPIRTVQKIYSEADSENIPFGDTIFTRSRAAGNRPYLLIEPPYKVNGEDKPKPSARSTRPNEEKDAKVDETLMSDPKGDENSVVTSTTSPGVSSKDKSKTASEAQSQNLGSNGSVEKTSKTLQPKKENANAGKGATVPLSKNLAQSAVPETSPVTSHESSKGETTSASPSPLKQDEEKSAVSSPSIRPSLEDNILLGVALEGSKRTLPIEEEMTPLPIPGESQEFAVQRNGSGPPATKDKKDPKQND 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03303 690 MobiDBLite consensus disorder prediction 582 632 - -
Aip07g03303 690 MobiDBLite consensus disorder prediction 521 562 - -
Aip07g03303 690 Gene3D - 291 346 IPR023408 -
Aip07g03303 690 MobiDBLite consensus disorder prediction 488 519 - -
Aip07g03303 690 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 2, CHLOROPLASTIC 1 688 - -
Aip07g03303 690 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 688 IPR045042 -
Aip07g03303 690 MobiDBLite consensus disorder prediction 484 690 - -
Aip07g03303 690 SUPERFAMILY Sm-like ribonucleoproteins 275 345 IPR010920 -
Aip07g03303 690 Gene3D - 196 289 - -
Aip07g03303 690 Pfam Mechanosensitive ion channel 235 439 IPR006685 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03303 Aip-Chr7 122122621 122128734 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03303 1 670 Mechanosensitive Ion Channel Family AT1G58200 52.754 0.0 714
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03303 K22047 - gmx:100796022 1077.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03303 07 122122621 122128734 Aip07g03303 07 122122621 122128734 ECH