Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03300 ATGCTGTGCGAAGCCAAAGCCAGAAACGATAACGTGTGCGCCGACATCGTTTTCAATTCCAATTCCAATGTGTGTGTTTGTTCTTTCGTGCTAAGCTTCAATCTCAAAGAGGACTTAGTTCTGAGGAATATTCCTTCTTCCTTTCCTTTTGTTTCTTCCCTCAAAGCTTGGAATATCGCAAACTCAGAATCATACTTCGTTTGCATCACTCAGTTCCATTCAACAATGGCCTATTCGGGTTCACATAGGCTACACAGCAATATCGAAAGCTGCGGTTTTTGTCATAAGCCCATGTGTGCAGATCGATTGTGTTTTGTAAATATCAATCATTCGCCAGAGTGTTTGAGGCGGGATTCTTCTGCACTTATCCTATCCAGAGTACATGTCCCACTTAGGCCCTTACGATGTGTTTCGGTGTGCCAGTCCACACTAATACCAGCTGGAGGGTGTGAGGCTCCACTCAGGAATTTGGCTACTATTTCTTTATCAAGGCCACAGTGCACTATATCAGGAAAACCCATTGTACAATTTGTACATCAATTCATCCCTGCCCTTGGTATCATTGGTTTTGCTGTCTGGGGTCTAGAGCCACTTCTGCGCCTGAGCAGGACTCTATTTCTGCAAAAGACTGACAAAAGTTGGAAGAAAAGTAGTTTGCGTTATTTAATGAAATCTTATCTTCAACCTTTGCTGCTATGGACAGGGGTTATGCTCATATGCAGGGATTTAGATCCATTAGTCTTACCATCAGAAACCAGTCAGGCTGTGAAGCAACGGCTGCTGAGTTTTGTGAGATCCTTGTCAACAGTCCTTACATTTGCTTATTGTTCTTCAAGCTTAATTAAGCAAGCACAAAAAAGTTGTATGGAGATGAATGACTCCAGTGATGAAAGGAATATGAGGATTGATTTTACTGGTAAAGCTTTATATACTGCAATATGGGTAGCTGCTGTGTCACTGTTCATGGAGTTGCTGGGATTCTCCACACAGAAATGGTTGACTGCTGGTGGTTTGGGCACAGTATTGCTTTCGCTTGCAGGTCGTGAGATATTCATGAACTTCCTTTCAAGTATAATGATTCATACAACTCGACCATTTGTTGTGAATGAGCGGATTAAAACAAAGATTAAAGATGATGAGGTTTCTGGTAGAGTTGAGCATGTAGGCTGGTGGTCACCAACAATTGTTAGAGGTGCTGATTGTGAAGCAGTACATATTCCTAACCAGAAGTTGAGTGTAAACATTGTAAGGAATCTTAGTAAGAAATCTCATTGGCGCATCAAGACTCATCTTGCCATCAGTCACTTGGATGTTAACAAGATCAATAATATCCTAGCTGATATGCGCAAGGTTTTGGCTAAAAATCCTCAAATAGAGCAGAAAAGATTGCATAGAAGGGTTTTTCTGGAGGATATCAATCCAGAAAATCAGGCTCTTATGATATTAATATCTTGCTTTGTTAAAACTTCACATTCCGAAGAGTACCTTCGTGTTAAGGAGGCTATTCTCTTGGATCTTCTCAGAGTTATCGATCATCATGGAGCTCGACTAGCGACCCCCATCCGCACAATTCAGAAGATGTACAGTGTCACTGATTCAGAAGCCGATCCATTTGATGAGAACCTATTCACTCGTTCCAGAGCTAAGGCTAACCGTCCATTCTCATCAAAGGATTCACCTTACAATGTTAAGCCTTCAATTCATTCGAACATTACAAACGAGAAGGATACCAAGTTTGAGGAAACCTTGACATCTGACTTAAAAGTAGATGACGACTTTGCAGGGCCATCAACCTCCACATCCAGTGTAAACTCCAGCAACGAGAAATTTAACCCTTCTGAATCCAAAACCAAGAATATGGATCGTGACAATTCGGTCCAGAAGACATCCAAATCCATGCAGCCCAAGGAAAAAGCAGGAAGTGCAGGAAACAGGACATCACCGGAATTTTTGTTGACTTCCAAGAAGTCAGGCAGAGGAGATGCTACTAATTCTGTTACCTCTTCACCATCAAAGAAAGGTGAAGAAAAAGATAAATCTGGTGGCTCATCATCATCAACTATTCCTTCCTTGAAAGAGAATATTGTTCTTGATGCTGCCTTGCTGGGAGCGAAACGAACACTTGAAATAGACGACAAAATTAGTCCACCTATCGCTGCAGAGCCTCCAGAATTCGCTATCCAACAGAAAGGATGTGAACCTCGTGGAATTAAGGATCACAAGGGTTGTAAGAAGTCTCCTAATGCTAAGCAGAGTGATTAG 2262 0.4178 MLCEAKARNDNVCADIVFNSNSNVCVCSFVLSFNLKEDLVLRNIPSSFPFVSSLKAWNIANSESYFVCITQFHSTMAYSGSHRLHSNIESCGFCHKPMCADRLCFVNINHSPECLRRDSSALILSRVHVPLRPLRCVSVCQSTLIPAGGCEAPLRNLATISLSRPQCTISGKPIVQFVHQFIPALGIIGFAVWGLEPLLRLSRTLFLQKTDKSWKKSSLRYLMKSYLQPLLLWTGVMLICRDLDPLVLPSETSQAVKQRLLSFVRSLSTVLTFAYCSSSLIKQAQKSCMEMNDSSDERNMRIDFTGKALYTAIWVAAVSLFMELLGFSTQKWLTAGGLGTVLLSLAGREIFMNFLSSIMIHTTRPFVVNERIKTKIKDDEVSGRVEHVGWWSPTIVRGADCEAVHIPNQKLSVNIVRNLSKKSHWRIKTHLAISHLDVNKINNILADMRKVLAKNPQIEQKRLHRRVFLEDINPENQALMILISCFVKTSHSEEYLRVKEAILLDLLRVIDHHGARLATPIRTIQKMYSVTDSEADPFDENLFTRSRAKANRPFSSKDSPYNVKPSIHSNITNEKDTKFEETLTSDLKVDDDFAGPSTSTSSVNSSNEKFNPSESKTKNMDRDNSVQKTSKSMQPKEKAGSAGNRTSPEFLLTSKKSGRGDATNSVTSSPSKKGEEKDKSGGSSSSTIPSLKENIVLDAALLGAKRTLEIDDKISPPIAAEPPEFAIQQKGCEPRGIKDHKGCKKSPNAKQSD 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03300 753 MobiDBLite consensus disorder prediction 549 570 - -
Aip07g03300 753 MobiDBLite consensus disorder prediction 715 753 - -
Aip07g03300 753 MobiDBLite consensus disorder prediction 733 747 - -
Aip07g03300 753 MobiDBLite consensus disorder prediction 594 613 - -
Aip07g03300 753 MobiDBLite consensus disorder prediction 549 577 - -
Aip07g03300 753 Gene3D - 260 364 - -
Aip07g03300 753 MobiDBLite consensus disorder prediction 626 670 - -
Aip07g03300 753 SUPERFAMILY Sm-like ribonucleoproteins 350 420 IPR010920 -
Aip07g03300 753 Pfam Mechanosensitive ion channel 307 516 IPR006685 GO:0016020|GO:0055085
Aip07g03300 753 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 76 650 IPR045042 -
Aip07g03300 753 PANTHER MECHANOSENSITIVE ION CHANNEL-LIKE PROTEIN 76 650 - -
Aip07g03300 753 MobiDBLite consensus disorder prediction 589 694 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03300 Aip-Chr7 122104267 122111799 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03300 82 713 Mechanosensitive Ion Channel Family AT1G58200 50.152 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03300 K22047 - gmx:100797302 824.313