Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03278 ATGGCACCAAGCTTTGATTGCGTTTCAAGCCTGCTCTGTGCAGAGGACACAAGCTTCTTCGATGATAATCCTTATGGGGGTAGTGGTGGTGCCATGGATGAAGTGTTTGATGAGGATTCATGGCGTCCTAGGTGTTATAATAATAAAAAAGGTTGCAACTTTGATGGTGATGAGGCAGATGGGTATCCATTGCAGAGTGATGAGTGTGTGGCAGTGATGATGGAAAAGGAGTGTGAACACTGGCATGGTGGTGCCGCTTACTTGAACAGGTTACAATCTGGGGATTTGGATTTTGGGGCCAGAAATGAGGCCATTCATTGGATTGAAAAGGTTCGAGCACATTTTGGTTTTGGACCTCTATGTGAATATCTATCTATAAATTACTTGGATCGATTTCTTTCATCGTATGAATTACCAAAGGGAAGAACTTGGACAATGCAATTGCTGGCAGTGGCCTGTTTATCAATTGCAGCGAAAATTGATGAGACTGAAGTTCCTTTCACCCTTGATTTGCAGGTTGGTGAATCCAAGTTTGTATTCGAAGCTAAAACCATACAGAGAATGGAGCTTCTAGTACTAAGCACATTGAGGTGGAGAATGAATGCAATTACTCCATTCTCCTTCATTGATTATTTCCTTTCCAAGATCAATGATGGTAATGAGAGTCCATCATTAAGATCGTCGATCTTGCGATCCATCCAGCTTATCTTGAGTACCACAAGAGGGATTGAGTTCTTGGAGTTCAAGCCATCAGAGATTGCGGCGGCAGTGGCAATATCTGTTGTCGGGGAAACCGAACCGGTTGACACTGAGAAAACTACTTCTGTTCTGATTCAATACATAGACAAGGGGAGAGTGTTCAAGTGTTTTGAATTGATCAAGGAACTTGCATTGAACATTGTGAATGTCAATGATCCAAATGGTTCTTCTTCTACAATCCATTGTGGTGTGCCTCAAAGTCCAATAGGAGTGTTAGATGCATTGTGCTTCAGCTACAAAAGTGATGACTCAAATGCAGGTTCATGTGCAAGTTCTTCACACACAACTCCAGATCCTAAAAGGAGGAAGCTAAACAAAACTTGTGGATCAGAGGCACTATTGTAG 1104 0.4221 MAPSFDCVSSLLCAEDTSFFDDNPYGGSGGAMDEVFDEDSWRPRCYNNKKGCNFDGDEADGYPLQSDECVAVMMEKECEHWHGGAAYLNRLQSGDLDFGARNEAIHWIEKVRAHFGFGPLCEYLSINYLDRFLSSYELPKGRTWTMQLLAVACLSIAAKIDETEVPFTLDLQVGESKFVFEAKTIQRMELLVLSTLRWRMNAITPFSFIDYFLSKINDGNESPSLRSSILRSIQLILSTTRGIEFLEFKPSEIAAAVAISVVGETEPVDTEKTTSVLIQYIDKGRVFKCFELIKELALNIVNVNDPNGSSSTIHCGVPQSPIGVLDALCFSYKSDDSNAGSCASSSHTTPDPKRRKLNKTCGSEALL 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03278 367 Pfam Cyclin, C-terminal domain 203 299 IPR004367 -
Aip07g03278 367 MobiDBLite consensus disorder prediction 339 367 - -
Aip07g03278 367 PANTHER CYCLINS 1 359 IPR039361 -
Aip07g03278 367 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 359 - -
Aip07g03278 367 SUPERFAMILY Cyclin-like 64 201 IPR036915 -
Aip07g03278 367 SMART cyclin_7 106 194 IPR013763 -
Aip07g03278 367 CDD CYCLIN 101 193 IPR013763 -
Aip07g03278 367 Gene3D - 84 201 - -
Aip07g03278 367 Gene3D - 202 291 - -
Aip07g03278 367 Pfam Cyclin, N-terminal domain 72 201 IPR006671 -
Aip07g03278 367 SMART Cyclin_C_2 203 331 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03278 Aip-Chr7 121612627 121615747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03278 84 343 Core Cell Cycle Gene Families AT2G22490 53.030 2.14e-83 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03278 K18810 - gmx:547739 442.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03278 07 121612627 121615747 Aip07g03278 07 121612627 121615747 ECH