Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03277 ATGGGAGAAGATTGTGGAACCTGGTTACCGCGTATGCAATTTGGTTGGCAGTCACCCAATTTGGGTTCCTTTAGTGTTCCCCCTAATGCGTGGAAGCAAAATGGTATTTCTGCCACTGCCGTGAACTCTGGCATCAATGTCATAGCAAGGAATGAAACAATGCCAGCTTATGAGTCACCTTCAATGCCCAATTTGCCATTAGGATGTTCTAATGAACCCCATCCTTGGTTTTATTGTTTGCCTCGCTCTCGACAGGAGTTTACTCCTGCTCCAAACTTTGCTGCTGAGGAAAAATTCCTTGCCGATCGTGTAAAAGGTTTGAGGGGCAAATTTGCTCCTTATGGTGAATCAGGCTCCCCTCAGAAGCAATTCCTTGTTATTGATCAGACGGGTGGTCAAACAACTGTTGTTTATAGTTCTAAGTTTGGGAGTCCCAATGAGTGCCTTGCTTCTTGGCATTCAAAATTGCACGGCACAAACTATTTGAATGGGGAATACCCTTTGGGAAAAGAATTGAGCCATCCGAATGGGCCACTTGTGGATGATAAAGGGGATGAGAATCTGGGAACTGGTGTTGAAAGCGAGATGCATGAAGACACGGAAGAAATTAATGCATTGCTTTCCTCTGACAGTGATGGTTATTCTACGGGGAATGATGATGACGACGATGAAGTTACCAGCACAGGGCATTCTCCAAGTACAATGACCAATCTTTATAACCACGGAAAATTTGGAGGAATTGAAGAAGTTGCAAGCTCCACTGGGAGAACAAAGAAGAGGAAGCTATTAGATGGTTATCATGATGGCTTACAATTTATTGGTACTACCGATTCTTTGAAGTCGAAGAACAAATCCTTTGCAATGGAAGATGATGCCGAATCGAGATGTTCCAACTGCTACAATGGGAGATCTGAAGAAACGGATTCCTTGTCAGTTAACAAGAAGATGAGAAAGGAGAAATTACGAGAACTTTTGAATGTTCTTCAGAGCATGATTCCTGGTGGCACGGACAAGGACAGGGACCCGGCTATGCTCTTGGATGATGCCATACGCTGCTTGAAAGCCATGAAAGTTGAGGCTAAAGAGCTTGGACTCAAGTGA 1101 0.4405 MGEDCGTWLPRMQFGWQSPNLGSFSVPPNAWKQNGISATAVNSGINVIARNETMPAYESPSMPNLPLGCSNEPHPWFYCLPRSRQEFTPAPNFAAEEKFLADRVKGLRGKFAPYGESGSPQKQFLVIDQTGGQTTVVYSSKFGSPNECLASWHSKLHGTNYLNGEYPLGKELSHPNGPLVDDKGDENLGTGVESEMHEDTEEINALLSSDSDGYSTGNDDDDDEVTSTGHSPSTMTNLYNHGKFGGIEEVASSTGRTKKRKLLDGYHDGLQFIGTTDSLKSKNKSFAMEDDAESRCSNCYNGRSEETDSLSVNKKMRKEKLRELLNVLQSMIPGGTDKDRDPAMLLDDAIRCLKAMKVEAKELGLK 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03277 366 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 305 356 IPR011598 GO:0046983
Aip07g03277 366 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 313 362 IPR036638 GO:0046983
Aip07g03277 366 MobiDBLite consensus disorder prediction 208 240 - -
Aip07g03277 366 MobiDBLite consensus disorder prediction 176 195 - -
Aip07g03277 366 PANTHER TRANSCRIPTION FACTOR BHLH145 1 365 IPR037546 -
Aip07g03277 366 PANTHER TRANSCRIPTION FACTOR BHLH145 1 365 - -
Aip07g03277 366 MobiDBLite consensus disorder prediction 172 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03277 Aip-Chr7 121563188 121565258 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03277 76 361 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50010 31.488 4.52e-21 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03277 - - gmx:102668102 390.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03277 07 121563188 121565258 Aip07g03277 07 121563188 121565258 ECH
Aip07g01791 07 40137502 40138575 Aip07g03277 07 121563188 121565258 PCT