Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03273 ATGGGTTATCTCTCTTGCAATGCCGACTCTGCAATCGCCACCTGTGACCCTCACTACTGTCATCTCAAGAACCGCAGCCACGGCAGCGTCTACAAAGCCACACTCGACGGCGGCAAGCTCATCGCCGCCGTCAAGAAAACCAAGCACGCCAAACCATCATCACGCCGTCACCAAAGTACCGCCGCAGCATCTTGCACCGGTTGCGGCAACTGCACCAGCCCGGCGGAGAACGAGATCGAGATCCTCTCACGCGTCTTTAGCCCCCGCCGGCTAGTGAACCTCATCGGATTCTGCACCGATCCAAGCAACGGCGGCAAGCTCATCGTCGTCGAGTACATGCCGAACGGCTCCCTCCACGACCTCCTCCACTCGCCGGTCCGACCGCCCGGTTGGACCGCACGCGTCCGGCTCGCACTTCAAATCGCGAAGGCGGTTCACGCGCTTCACACATCAAACCCTCCGGTGATTCACAGAGACATTAAATCTTCCAACGTTCTCATCGACGGAGCGTGGAACGCGAGGCTCGGAGACTTTGGGCTCGCGCTGAGAGGACACGTGGAGGACGTGCGCGTGAAGTGCACACCGCCAGCTGGCACGTTAGGGTACCTTGATCCTTGCTATCTTGCGCCCGAGGATCTGAGCGCTAAGAGCGACGTCTTCAGCTTCGGGATCTTGCTGTTAGAGATTCTCAGCGGCAGGAACGCCATCGACGTGAACTTCAGTCCACCGTCGGTGGTCGACTGGGCAGTGCCGTTGATTAAGAGAGGAGAGTTCGCCGTCATTTGCGACAGGCGGATCGGAGTGCCGTCGGATAAAGAGGTGGTTCGGATGGTGGCGGTGATGGCGGCCATGTGCGTGAGGTCCACGGCGGAGAAGAGGCCGTCGATGGAGGAGGTTGTGCAGTGCTTGAAGATTGCAAGGAAGAGAATGCGGGCGGCGCCGATATGGAGTGGATTGAGGTGGCGCGTGAGGCGCGTGGAGAGTGAGAAACGGTTAGAATGGGAAGCACGTGAGTGTGACAGTTATTACCATAGGAGTGAGGAGGAGGTAGTGAGAGCGGCGAAGGGTGGTGCGAGTAGAAGGAAGAACAGGAAGGTATCCAATGTGACGGGTGCAGAGTATTATGGTAGACCCTCATCCAATCATGTAGTGAGGTCAAAGTCAATTGGTGCGGGTTCTCTGAAAGTAAATTCGGATTCGGGAAGTTCGCGGTCGCAACAAAACGGGTCGGGTTTCGTGAGGAGAAGGTCGAAGCTGAACAAGTCTAGGTCCATGGGGGTGTTGCAAGGTTCTTCTCGTTTATCATCACATTATTATGAAAGTGATCCAATACATTCGTTAGAAACGGCAATGTCGTCTAAGTGGGTCATTACGGATAAGTTGGAAAAAAAACTGCTTGAGAAACCGTTAGTTAATTCTGTTGGAATTAATTAA 1434 0.5516 MGYLSCNADSAIATCDPHYCHLKNRSHGSVYKATLDGGKLIAAVKKTKHAKPSSRRHQSTAAASCTGCGNCTSPAENEIEILSRVFSPRRLVNLIGFCTDPSNGGKLIVVEYMPNGSLHDLLHSPVRPPGWTARVRLALQIAKAVHALHTSNPPVIHRDIKSSNVLIDGAWNARLGDFGLALRGHVEDVRVKCTPPAGTLGYLDPCYLAPEDLSAKSDVFSFGILLLEILSGRNAIDVNFSPPSVVDWAVPLIKRGEFAVICDRRIGVPSDKEVVRMVAVMAAMCVRSTAEKRPSMEEVVQCLKIARKRMRAAPIWSGLRWRVRRVESEKRLEWEARECDSYYHRSEEEVVRAAKGGASRRKNRKVSNVTGAEYYGRPSSNHVVRSKSIGAGSLKVNSDSGSSRSQQNGSGFVRRRSKLNKSRSMGVLQGSSRLSSHYYESDPIHSLETAMSSKWVITDKLEKKLLEKPLVNSVGIN 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03273 477 MobiDBLite consensus disorder prediction 392 415 - -
Aip07g03273 477 MobiDBLite consensus disorder prediction 354 379 - -
Aip07g03273 477 Pfam Protein tyrosine and serine/threonine kinase 75 303 IPR001245 GO:0004672|GO:0006468
Aip07g03273 477 ProSiteProfiles Protein kinase domain profile. 16 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g03273 477 PANTHER - 1 25 - -
Aip07g03273 477 PANTHER - 25 436 - -
Aip07g03273 477 SUPERFAMILY Protein kinase-like (PK-like) 26 304 IPR011009 -
Aip07g03273 477 PANTHER OS01G0750732 PROTEIN 1 25 - -
Aip07g03273 477 PANTHER OS01G0750732 PROTEIN 25 436 - -
Aip07g03273 477 ProSitePatterns Serine/Threonine protein kinases active-site signature. 155 167 IPR008271 GO:0004672|GO:0006468
Aip07g03273 477 Gene3D Phosphorylase Kinase; domain 1 21 116 - -
Aip07g03273 477 MobiDBLite consensus disorder prediction 392 428 - -
Aip07g03273 477 SMART serkin_6 26 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g03273 477 Gene3D Transferase(Phosphotransferase) domain 1 117 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03273 Aip-Chr7 121512087 121513606 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03273 26 314 Receptor kinase-like Gene Family AT3G59420 40.476 2.51e-56 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Aip07g03273 PK_Tyr_Ser-Thr 6.4e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03273 - - ahf:112706221 832.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03273 07 121512087 121513606 Aip07g03273 07 121512087 121513606 ECH