Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03272 ATGGAATTTGACGAGCACGAAGACCAAGAGGAAGAGGAAATGGGGATCCCGGAGCCGCCGCCTGCGCCGCAGGGTTATGACTCGTTTGGAAACTCGGCGGCGAGGTCCAAATCAGAAGGAGGAGGAGGAGGAGGAGCTGCCGCCGTGACACCTGGTCGGAAAGGTGGAACCGGCGTCAGGTACAGAGAATGTCAGAAGAATCACGCGGTCAGTATCGGTGGCCACGCCGTTGACGGTTGCTGCGAGTTTCTAGCCGCCGGAGAGGAAGGAACACTGGAGGCCGTGATCTGCGCTGCCTGCAACTGCCACCGCAATTTCCACCGCAAAGAGATCGACGGCGAGACAAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGCCCCTACCACCAGAACACTCCTCGGCCTCAGCAACCGCCGCAACCGCCTCTGCACCACCACCAGTACCACCAACACCATCAATTCTCCCCTTACTACCACCGCGCACCGCCTCCTCCTACCGGCGGATACCTCCACCTGTCAACTCCGCCGGTGTCGCAGCACCGGCCTCTAGCTCTTCCAGCAGCCGCATCAGGCGGCGGTGGATTCTACAAAGAGGAAGAAGACATGTCAAACCCTAGCAGCAGCGGCGGCGGCGGCGGCGGTAGCGGAAGCGGAACAAAGAAGAGGTTTAGAACGAAATTCACACAGGAGCAGAAGGATAAGATGCTTGCATTCGCGGAGCAGTTAGGGTGGAGAATCCAGAAGCATGATGAATCTGCAGTTGAGAATTTCTGCGCTGAAACCGGTGTTAAGAGACATGTTCTCAAGGTTTGGATGCATAACAATAAGCACACTCTCGAGTATGGAGGTGAACGTGTATGGCATGCAGAGAAAAGCAGTGTTATCTTCTCCTGA 921 0.5342 MEFDEHEDQEEEEMGIPEPPPAPQGYDSFGNSAARSKSEGGGGGGAAAVTPGRKGGTGVRYRECQKNHAVSIGGHAVDGCCEFLAAGEEGTLEAVICAACNCHRNFHRKEIDGETSXXXXXXXXXXXXXXXXXXSPYHQNTPRPQQPPQPPLHHHQYHQHHQFSPYYHRAPPPPTGGYLHLSTPPVSQHRPLALPAAASGGGGFYKEEEDMSNPSSSGGGGGGSGSGTKKRFRTKFTQEQKDKMLAFAEQLGWRIQKHDESAVENFCAETGVKRHVLKVWMHNNKHTLEYGGERVWHAEKSSVIFS 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03272 306 MobiDBLite consensus disorder prediction 119 234 - -
Aip07g03272 306 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 60 111 IPR006456 -
Aip07g03272 306 MobiDBLite consensus disorder prediction 1 15 - -
Aip07g03272 306 Pfam ZF-HD protein dimerisation region 59 111 IPR006456 -
Aip07g03272 306 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 1 55 289 - -
Aip07g03272 306 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 55 289 - -
Aip07g03272 306 MobiDBLite consensus disorder prediction 1 59 - -
Aip07g03272 306 Gene3D - 214 290 - -
Aip07g03272 306 SUPERFAMILY Homeodomain-like 215 287 IPR009057 -
Aip07g03272 306 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 61 110 IPR006456 -
Aip07g03272 306 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 229 285 IPR006455 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03272 Aip-Chr7 121503254 121504494 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03272 7 289 ZF-HD Transcription Factor Family AT4G24660 48.592 3.88e-67 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Aip07g03272 ZF-HD_dimer 4.3e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03272 - - gmx:100820567 327.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03272 07 121503254 121504494 Aip07g03272 07 121503254 121504494 ECH