Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03261 ATGGCTTCAACAAAGTTGCCTTCAGGTGCAAGCAAGAAGTTCAAGCCTACCGATGAAGAACTCATTCAAGATTTTCTCCTTAACAAAATCAATGGGAGGCCTCTACCAAACAATGGAACCATTCTTGAAGGTGAATTGTTTGGTACGGAGAAGAATCCATGGAAAATTTGGGAAGAAAACGTTGAAAATTCTTATGACGGGAAGGACCTCTATTTCTTCACTACTCTGAAAAGGAAGTTCTCAACTAACAGCTTGCGGATGGTTCGCACCATTGGGTTGGGTTTTTGGGAAGGTGAAGACATCGGAAAAGAGATTATGGCCAATAAAACTAACCAGCGCATTGGAATGAGGAAACGATATCGCTTTGAGAAGAGTGGTACTAGCCATGATGGTGGATGGATCTTGCATCAATATAGCATTGATTCTTCTTTGTTACCAAATCCATCCAATAATGCCAATGATTATGCTGGGAAAGTAGAATTTGTTAACCAATCAGAGAATGGAGATGAAAGGATGGAGATTCAAAATGAATCACCAAACCAATCAGACAAAGCAAACCAATCAGAGAATAATGGAGATGAGAAGATTGATGAGATTCAGAGAGAACTAACAAATCAATTAGAGAATAATGAGGATGAAATACAGGTTGAGGCTTTTGATACTACTATTGGAATTGAGGCAAACTGTGAGGAAAAGGGAGATGGTGATGATGATGATGATGAAGATGACAATGATATGACATGGCCAGAGTATTTTGCAATGCAATTGTTAGAACTTAACAAAGACTGGTTCATCCCAAAGGATGATGTCCCCATTATTCCAAATAAATTTCACAATGACATGTTAAAACGGTTTAAAAAAGTTTTATGA 870 0.3805 MASTKLPSGASKKFKPTDEELIQDFLLNKINGRPLPNNGTILEGELFGTEKNPWKIWEENVENSYDGKDLYFFTTLKRKFSTNSLRMVRTIGLGFWEGEDIGKEIMANKTNQRIGMRKRYRFEKSGTSHDGGWILHQYSIDSSLLPNPSNNANDYAGKVEFVNQSENGDERMEIQNESPNQSDKANQSENNGDEKIDEIQRELTNQLENNEDEIQVEAFDTTIGIEANCEEKGDGDDDDDEDDNDMTWPEYFAMQLLELNKDWFIPKDDVPIIPNKFHNDMLKRFKKVL 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03261 289 SUPERFAMILY NAC domain 12 153 IPR036093 GO:0003677|GO:0006355
Aip07g03261 289 MobiDBLite consensus disorder prediction 169 194 - -
Aip07g03261 289 Coils Coil 196 216 - -
Aip07g03261 289 MobiDBLite consensus disorder prediction 231 246 - -
Aip07g03261 289 Gene3D NAC domain 17 166 IPR036093 GO:0003677|GO:0006355
Aip07g03261 289 ProSiteProfiles NAC domain profile. 8 162 IPR003441 GO:0003677|GO:0006355
Aip07g03261 289 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 13 226 - -
Aip07g03261 289 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 13 226 - -
Aip07g03261 289 Pfam No apical meristem (NAM) protein 13 140 IPR003441 GO:0003677|GO:0006355
Aip07g03261 289 MobiDBLite consensus disorder prediction 227 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03261 Aip-Chr7 121387773 121390754 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03261 5 140 NAC Transcription Factor Family AT5G13180 32.609 9.02e-15 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aip07g03261 NAM 2.1e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03261 - - ahf:112730219 547.74