Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03253 ATGAATCGAGAGCTAATGAAAGAGGTTTCTGATCAGGAAATCAAAGAAGCTACTTTCAGCCTTGGAAGTCTTAAGGCACCGGGTCCAGATGAATTAAATGGCCTTTTTTTCCAAAAGCATTGGGCAATTATTGAAAAGGAGGTTTCTTATAAAATTAAGATCAATGGTGTTTTGTCTAGAAGTTTTGTGCCGCAGAGGGGACTAAGGCAGGGAGACCCCATTTTGCCATACCTGTTTATCATAGCAGCTGAAGTTTTTACTATTCTTGTGGACAAGGCTAAAGACGAGGGTAGAATCTCTGGTGTCAGAATTGCTCCCACTGCTCTAGCCATTTCTCATATTCTCTTTGCGGATGATTGCATTATCTTCTCGAAGGATAGTGAGGAGGAAGTTTATCAGCTCATTACTATTTTAAATATGTATACAGAAGCCTCGGGGCAGCAAATAAATGTTGACAAGTCTGGGATTACGTTCCACAATCAggttccgatcagaaatagagtagaaatagaagagatcttagggttgcctgcttgggatcaaccagTTTGGGTCTTCGGGGTTTCCTTGAGTCGGGTTGGGTTGCTCATGTCCACTAGAGAGTTTCAGTCCATCCCAGATTGTGCTTGTTCTGAGGTAGTGGGTCTGCATTCACCTCTGATGTGGGTTAGCTGCGGTTTCAGCATCGCCATCCTTTGGAGGGTGGTGGCGGAGCCACCTCATGCACCAATGATGGATTTTGTGAAGAACTCTCGCGGTTATGTGATGGAACTCAACAAGCACCTTGCTAGTGATGAAAGAATTGAAATTTGTCAAATTCCTGTTGGTGATGGCATTACCTTGTGCCGCCGTGTCATCTGA 861 0.4065 MNRELMKEVSDQEIKEATFSLGSLKAPGPDELNGLFFQKHWAIIEKEVSYKIKINGVLSRSFVPQRGLRQGDPILPYLFIIAAEVFTILVDKAKDEGRISGVRIAPTALAISHILFADDCIIFSKDSEEEVYQLITILNMYTEASGQQINVDKSGITFHNQVPIRNRVEIEEILGLPAWDQPVWVFGVSLSRVGLLMSTREFQSIPDCACSEVVGLHSPLMWVSCGFSIAILWRVVAEPPHAPMMDFVKNSRGYVMELNKHLASDERIEICQIPVGDGITLCRRVI 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03253 286 Gene3D Vaccinia Virus protein VP39 228 285 IPR029063 -
Aip07g03253 286 ProSiteProfiles Reverse transcriptase (RT) catalytic domain profile. 1 190 IPR000477 -
Aip07g03253 286 PANTHER - 37 180 - -
Aip07g03253 286 Pfam O-methyltransferase 232 285 IPR002935 GO:0008171
Aip07g03253 286 Pfam Reverse transcriptase (RNA-dependent DNA polymerase) 49 169 IPR000477 -
Aip07g03253 286 PANTHER REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED 37 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03253 Aip-Chr7 121263926 121267570 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03253 232 285 Monolignol Biosynthesis Gene Families AT4G34050 60.000 1.79e-15 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03253 - - ahf:112763956 270.781