Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03240 ATGGTGACCAACAGGGATCATTGGACTGACCTCGAGGCTATGGGTTTCGAAGAACAGGAAGGTGTGTATGACACGAGGATTGAAGCTGAAGAAACTATAGCTGAATATGAAGGCAAGGAAGATCCGATTTTTCATGAATTGAAAGGGATGGAAGGTCTCCAAGTAGAAGATATCCTTCAAATGGAGTTTTGTACTCCTGAAGAAGCACGGTATTTTTATAACAGCTATAGCCGATTGAAGGGATTTTTCACGAGGCAGGGGAAAAAGAGGGAGCACAAGGTAGTGACTCGTTGTGGCTGCTTAGCTGAGATGAGAATTAAGCGAAAAGATGGTAGTGACAAGTGGTACGTCTCTCGGTTTTTGGACAACCATAACCATGAGCTTGTAGCTGGGAAGTATGTCGACTATTTGAGGTCGCACAGGGGGCTATCTGATGTTGAAATTTCTCATCTGACTAGCTTGAGGGAGCAAAGAAGCTTGCAGAATGGGGATGTTAATGCAGCAGTTCGCTGTTTGGAAGGTGTAGCTCATGTGGATAACAGGATGTACTGGAGGTATAGGCTGGGGGAGGACAACAATATGTGCGACCTGTTCTGGAGCGATGGCTGTAGTCAGCTGGATTATGGAATTTTTGGTGATGTTCTTGCATTTAATGCCACATATGGTCGAAACAAGTATAATCTCCCTGTGGTTGTGTTTTCAAGAGTGAACCACCACAATCAAACCTGTGTTTTGGGGCGGCAATAG 747 0.4485 MVTNRDHWTDLEAMGFEEQEGVYDTRIEAEETIAEYEGKEDPIFHELKGMEGLQVEDILQMEFCTPEEARYFYNSYSRLKGFFTRQGKKREHKVVTRCGCLAEMRIKRKDGSDKWYVSRFLDNHNHELVAGKYVDYLRSHRGLSDVEISHLTSLREQRSLQNGDVNAAVRCLEGVAHVDNRMYWRYRLGEDNNMCDLFWSDGCSQLDYGIFGDVLAFNATYGRNKYNLPVVVFSRVNHHNQTCVLGRQ 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03240 248 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 88 147 IPR031052 GO:0006355
Aip07g03240 248 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 156 246 IPR031052 GO:0006355
Aip07g03240 248 Pfam FAR1 DNA-binding domain 86 129 IPR004330 -
Aip07g03240 248 PANTHER OS02G0262500 PROTEIN 156 246 - -
Aip07g03240 248 PANTHER OS02G0262500 PROTEIN 88 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03240 Aip-Chr7 121016165 121017504 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip07g03240 FAR1 1.7e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03240 - - aip:107620408 298.13