Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03235 ATGGATGATTCTTCAGCGCATAGAGATCGCAGGCCAGAAGCACTCGGAGACCTTGGGGTCCTTCCCGATGAAACCCTCTGCTCAATCTTAGAGTCTCTCTCTCCCCGCGACGTTGCTCGCCTTGCCTGCGTTAGCAGTGTCATGTACGTGTTGTGCAATGAGGAACCACTGTGGATGAGTCTATGCCTTAAAGGGGCATCTGGTTTGCTTCAGTACCAAGGCTCTTGGAAGAAAACTACCCTGCTGCATAATGAGAATCTGCCAGACAAATACAAAGAGTATCAACCACGACTACTATACTTTGATGGGTTCAACTCTTTATTTTTGTACAGGAGATTATACCGATGTCATACCACATTGGAGTCGTTTCATGCAGATGATGGAAATGTGGAAAGAAGGAAAGACCTATCCTTGAAGGATTTCTATGACCAGTATGATGCAAAGAAACCGGTTATGCTTACTGGATTGGCTGAGACATGGCCTGCCAGGCATAAATGGACAACTGATCAGCTGTTGCAAAACTATGGAGACGTAGCATTTAAAATTTCCCAAAGGAGTTCTCGGAAGGTCTCCATGAAATTCAAGGATTATGTCTCATACATGGAAGTTCAACATGATGAAGATCCCTTATATATTTTTGATGAAAAGTTTGCTGAAGTTGCACCTAGCTTATTGAAGGATTATTCTGTACCTCATCTTTTTCAAGAAGACTTCTTTGATATCTTAGATGCTGAACAAAGACCATCCTATAGGTGGCTAATAATTGGACCACAGAGATCTGGGGCCTCTTGGCACGTTGATCCAGCTCTTACTAGTGCATGGAATACTCTTCTTTCTGGCCGTAAAAGGTGGGCATTATATCCTCCAGGAAAGGTGCCTTTGGGTGTGACAGTGCATGTTAACGAAGAAGATGGTGATGTCAATATTGAGACCCCGTCATCACTTCAGTGGTGGTTGGACTATTATCCTCTCCTTCCTGATGAAGATAAGCCAATTGAGTGTACACAACTACCAGGAGAGACAATTTACGTTCCAAGTGGATGGTGGCACTGTGTTTTAAATTTAGAAACAACTATCGCAGTCACTCAGAATTATGTGAATTCAAATAATTTTGAATTTGTATGTTTGGACATGGCTCCTGGTTATCGTCATAAAGGAGTTTGTCGTGTTGGATGGCTTGCTTTAGATGAAGAAACTTATGAAAATGTCAGACAGAGCACATGTTATTCTGATTTGTCTAGGAAAGAGAAAAGAGCCAAAACTATCAAAGATGTAGATAATCTAAATTCTGAAAGTACCGTAAATGGCGCATCTAGGAACTATGGTTTATGGAAAGATGGATTTTCCTATGATATAGAGTTCTTATCCATATTCTTGGATAGAGATAGAGACCATTACCTTTCCCCGTGGAGCGTAGGCAACAGCATTGGTCAACGAGAACTAAGAGAATGGTTGTCGAAGCTTTGGATTCAAAAACCACAAATGAGAGAGCTTATATGGAAGGGGGCATGTATTGCCTTAAATGCTGACAAGTGGTTGGAATGTGCATCAAAAATTTGTGCCATCCACAATTTGCCTCTTCCCAGTGACGATGAAAGGCTTCCAGTTGGCTCGGGTAGCAATCCTGTTTATCTAGTGGGGAACTCTGTTGTTAAGATTTTTGTTGAAGGAGGACTGGAAGCTTCTCTTTATGGTTTCGGCACAGAGCTAGAGTTTTACAGGCTACTTCATGAAATCAACTCCCCTCTCAAGAAACATATTCCTAGTATTTTGGCCAATGGGATCATTTATGTTGAAGATGGATCTTTTAACAATTTAACTTGGGATGGAAAAGGAGTCCCTGACATCATTTCAAAGAGCAATCTCATCAAGACAAAATGTGATGTTCATGGTTTCTCATTTGGGGTATGGGGCAAGAAACAACTTGAGTATAAGAATGCTGGGATGGAAATGGATGGATCGGATAGTTTAGCAGGTCACTCAAGTATATGGCCATATATGATAATAAGACGATGTGAAGGGAAAATGTTTGCAGATTTAAGAGACACACTGTCATGGGAAGATGCAACAAACTTGGCCTCCTTCTTAGGGGAGCAGCTGAACCACCTTCATCTCTTACCACATCCACCTTTGAATATTTCATCTTTAACAGATATTGAACATGAATTGAGCTTTACTGGAACCGATGGTTGTGGTGCAACTGTTAATTATAAATCAAATACTGCAGCAGAATGGGGAGTCTTCCTAAGAAACTTAACAATGATGCGGAAGAATGTTTCAAGCCGTTTGACCAAGTGGGGAGATCCAATCCCTAGCAGTTTGATAGAGAAAATTGATGAATATGTCCCGCCTGATTTTGCTAAGCTGCTAAACATAATTGAGAATCTCCCAAGGGGTGCTTGTAAACCTTGCTCTTGGATTCACTCTGATATTATGGATGATAACATTTACATGGAACCATCTTCGGCTTATTCTATCTCAAGTGGGAATGCAGAAGATGCTGCCAAGGTAAATGGTCATTTGAGCAGCTATGATGAAGTGAAATCCTGGCGTCCTAGTTATATCCTTGATTTCAGTGATCTTTCAATAGGTGATCCGCTGTTTGACTTGATACCAATTTATTTAGATGTCTTTAGAGGTGATTCAGATCTCCTTAAGCGATTTTTAGAAAGCTATAAACTTCCTTTTGCAAGTCCCATATCAAAGTACGAGTCAACAGATGGTGGTCAGAAGTATGCCCGACTTTCATATGTTGCCATGTGCTATTGTATTTTGCATGATGAGAATGTGTTGGGAGCTATTTTTACTATATGGAAAGAATTGAGATCAGCAAAGTCATGGGAAGAAGTTGAGCTAACAGTGTGGGGCGAGTTGAACAATTACAATGGCTTTCCTTGA 2898 0.4092 MDDSSAHRDRRPEALGDLGVLPDETLCSILESLSPRDVARLACVSSVMYVLCNEEPLWMSLCLKGASGLLQYQGSWKKTTLLHNENLPDKYKEYQPRLLYFDGFNSLFLYRRLYRCHTTLESFHADDGNVERRKDLSLKDFYDQYDAKKPVMLTGLAETWPARHKWTTDQLLQNYGDVAFKISQRSSRKVSMKFKDYVSYMEVQHDEDPLYIFDEKFAEVAPSLLKDYSVPHLFQEDFFDILDAEQRPSYRWLIIGPQRSGASWHVDPALTSAWNTLLSGRKRWALYPPGKVPLGVTVHVNEEDGDVNIETPSSLQWWLDYYPLLPDEDKPIECTQLPGETIYVPSGWWHCVLNLETTIAVTQNYVNSNNFEFVCLDMAPGYRHKGVCRVGWLALDEETYENVRQSTCYSDLSRKEKRAKTIKDVDNLNSESTVNGASRNYGLWKDGFSYDIEFLSIFLDRDRDHYLSPWSVGNSIGQRELREWLSKLWIQKPQMRELIWKGACIALNADKWLECASKICAIHNLPLPSDDERLPVGSGSNPVYLVGNSVVKIFVEGGLEASLYGFGTELEFYRLLHEINSPLKKHIPSILANGIIYVEDGSFNNLTWDGKGVPDIISKSNLIKTKCDVHGFSFGVWGKKQLEYKNAGMEMDGSDSLAGHSSIWPYMIIRRCEGKMFADLRDTLSWEDATNLASFLGEQLNHLHLLPHPPLNISSLTDIEHELSFTGTDGCGATVNYKSNTAAEWGVFLRNLTMMRKNVSSRLTKWGDPIPSSLIEKIDEYVPPDFAKLLNIIENLPRGACKPCSWIHSDIMDDNIYMEPSSAYSISSGNAEDAAKVNGHLSSYDEVKSWRPSYILDFSDLSIGDPLFDLIPIYLDVFRGDSDLLKRFLESYKLPFASPISKYESTDGGQKYARLSYVAMCYCILHDENVLGAIFTIWKELRSAKSWEEVELTVWGELNNYNGFP 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03235 965 SUPERFAMILY Protein kinase-like (PK-like) 664 895 IPR011009 -
Aip07g03235 965 Gene3D - 14 92 - -
Aip07g03235 965 SMART cupin_9 210 377 IPR003347 -
Aip07g03235 965 Gene3D Cupin 111 367 - -
Aip07g03235 965 Pfam Cupin-like domain 147 369 IPR041667 -
Aip07g03235 965 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 4 898 - -
Aip07g03235 965 ProSiteProfiles JmjC domain profile. 219 382 IPR003347 -
Aip07g03235 965 SUPERFAMILY Clavaminate synthase-like 118 374 - -
Aip07g03235 965 Pfam F-box-like 21 64 IPR001810 GO:0005515
Aip07g03235 965 SUPERFAMILY F-box domain 7 68 IPR036047 GO:0005515
Aip07g03235 965 ProSiteProfiles F-box domain profile. 15 61 IPR001810 GO:0005515
Aip07g03235 965 PANTHER JMJC DOMAIN-CONTAINING PROTEIN 8 4 898 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03235 Aip-Chr7 120887181 120896371 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03235 6 961 Glycosyltransferase AT1G78280 60.637 0.0 1210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Aip07g03235 Cupin_8 2.3e-24 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03235 - - gmx:100792541 1639.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03235 07 120887181 120896371 Aip07g03235 07 120887181 120896371 ECH