Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip07g03219 | ATGGGAAGGTCTCCATGCTGCGATGAGAGTGGCCTTAAGAAAGGTCCATGGACTCCTGAAGAGGATCAAAAGCTTGTTCACCACATTCAGAAACATGGCCATGGAAGTTGGAGAGCACTTCCTAAGTTAGCGGGTCTTAATAGATGTGGCAAGAGTTGTAGACTTAGGTGGACTAACTATTTGAGGCCTGATATTAAGAGGGGCAAATTCTCCCAAGAAGAGGAGCAAACCATTCTCCATCTTCATTCCATTCTTGGAAACAAGTGGTCAGCAATTGCGACCCATCTTCCGGGGAGAACAGACAACGAGATAAAGAATTTCTGGAACACTCATTTGAAGAAGAAGCTGATTCAGATGGGTTTTGATCCAATGACTCATCAACCAAGAACTGACCTTGTTTCTACCCTCCCATACCTCATAGCTTTGGCAAGCATGATGGATACATCATCATCATCAATTGATGAACATGCTCTGAGCTTACAAGCAGAGGCAATTCAAATGGCAAAGCTTCAGTACCTTCATTACTTACTCCAATCTTCTTCATCAAATTCCAACCTTGCCTTCGACCATAACAATCCCATCAACATCACAAACATGGAACCTCCTTTCAGTTTGTTAAATGTGAAAGAGAATATTAATACTAATAATAATAATAATAATAATGGTCCTTCTTCATTTCCTCCTCATCATCATCATCATGGGAATGGGATTCTTATTGATGATGATAGTAGCTGTCAACCACTCCACTACCACCCAAACATGCTATTATCTCACTTTTTAGACCCACCATCACAACAAGTCTCTTTCAATTCCCAATCATGTTTGAATAATATTAATGAGCAAGGTCAAGGTTCTACTACTAACTATGCAATCATAAGTCAAATGGATCACACAACAGCTGATGATAATTCCTCCTGGATTGTTCCATCTTCTACTTCTCCATTATCATCTATTGCTCCAAATAATAATGGACCCTCTACTACTACTAGTAACAATAATAACAATAATAATAATCCAGGAGATACAAGCAGCACCACTTCTAGCTATGGAGGACCTGCTTCTTCCTCCTCTTCTTATTGGTCTGAACTCTTTCTTGTGGACCCTACTATCATGCATGAGCTACCTTAG | 1128 | 0.3998 | MGRSPCCDESGLKKGPWTPEEDQKLVHHIQKHGHGSWRALPKLAGLNRCGKSCRLRWTNYLRPDIKRGKFSQEEEQTILHLHSILGNKWSAIATHLPGRTDNEIKNFWNTHLKKKLIQMGFDPMTHQPRTDLVSTLPYLIALASMMDTSSSSIDEHALSLQAEAIQMAKLQYLHYLLQSSSSNSNLAFDHNNPINITNMEPPFSLLNVKENINTNNNNNNNGPSSFPPHHHHHGNGILIDDDSSCQPLHYHPNMLLSHFLDPPSQQVSFNSQSCLNNINEQGQGSTTNYAIISQMDHTTADDNSSWIVPSSTSPLSSIAPNNNGPSTTTSNNNNNNNNPGDTSSTTSSYGGPASSSSSYWSELFLVDPTIMHELP | 375 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip07g03219 | 375 | MobiDBLite | consensus disorder prediction | 300 | 352 | - | - | |
Aip07g03219 | 375 | CDD | SANT | 69 | 112 | IPR001005 | - | |
Aip07g03219 | 375 | PANTHER | TRANSCRIPTION FACTOR MYB39-LIKE | 1 | 363 | - | - | |
Aip07g03219 | 375 | SMART | sant | 13 | 63 | IPR001005 | - | |
Aip07g03219 | 375 | SMART | sant | 66 | 114 | IPR001005 | - | |
Aip07g03219 | 375 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 9 | 61 | IPR017930 | - | |
Aip07g03219 | 375 | CDD | SANT | 16 | 61 | IPR001005 | - | |
Aip07g03219 | 375 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR | 1 | 363 | - | - | |
Aip07g03219 | 375 | ProSiteProfiles | Myb-like domain profile. | 62 | 112 | IPR001005 | - | |
Aip07g03219 | 375 | Pfam | Myb-like DNA-binding domain | 67 | 112 | IPR001005 | - | |
Aip07g03219 | 375 | Pfam | Myb-like DNA-binding domain | 14 | 61 | IPR001005 | - | |
Aip07g03219 | 375 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 62 | 116 | IPR017930 | - | |
Aip07g03219 | 375 | SUPERFAMILY | Homeodomain-like | 11 | 108 | IPR009057 | - | |
Aip07g03219 | 375 | MobiDBLite | consensus disorder prediction | 213 | 240 | - | - | |
Aip07g03219 | 375 | Gene3D | - | 11 | 67 | - | - | |
Aip07g03219 | 375 | Gene3D | - | 69 | 116 | - | - | |
Aip07g03219 | 375 | ProSiteProfiles | Myb-like domain profile. | 9 | 61 | IPR001005 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip07g03219 | Aip-Chr7 | 120618071 | 120620374 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip07g03219 | 1 | 371 | MYB Transcription Factor Family | AT1G34670 | 51.646 | 1.21e-109 | 323 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Aip07g03219 | Myb_DNA-binding | 2.1e-16 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip07g03219 | K09422 | - | gmx:100782792 | 405.986 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aip07g03219 | 07 | 120618071 | 120620374 | Aip07g03219 | 07 | 120618071 | 120620374 | ECH |