Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03215 ATGGACATGGACATGGATGGCATCCCAGACAGCCTCGATTTCTCCGAACACAGCACCACCACACCCACGTCCGATGAGGACTGCAACTGGGATCATCTGTCCCCTCTCGTCAACTGGGAGTCCTTCACCACCGACAACGACGACTTTCACAGCCTCGTCGGTTCCATATTCGACGATGCGCGCGCCGCTGCCATCTTGAGCCAAGACCATGGCTACCTTGAGGAGGCCTCAAGCTTCGATGACGGCAGCGTCTCAGCAACAGAGGACAAAAGAGGCGGCTGCGAATATCTGAAGGACTTGCGGCTGGTCCACCTGCTGATGGCGGCGGCCGAGGCACTTGCCAGTGCCACCAAGAGCCGTGACCTGGCTCGAGTGATATTGGTTCGGCTCAAGGAGTTAGTGTCCTCCACCCAAGGCAGCACCATGGAGAGGCTCGCGGCGCACTTTACCGACGCCCTCCAGACTCTGCTAGAAGGCGCCTGTGGGGGTGCGCATAGCGCCACAAAGCACCATCCACTTCAAAGTGGGGACCACCAGCAAACAGACACAATAACGGCCTTCCAGCTTCTCCAAGACATGTCCCCTTACGTTAAGTTTGCTCACTTCACAGCTAACCAGGCCATCCTGGAGGCCGTAGCCCAGGAGAGGAGGGTTCACGTCGTTGATTATGACGTCGCAGAAGGGGCCCAATGGGCCTCCCTAATGCAGGCCTTTGTGTCCCATAAGGAAGGCTCACCGGGCCCTCACTTAAGGATCACCGCATTATCACGGGGTGGAAACAGCGGACGCAGATCCATCGCCACCGTTCAAGAAACCGGTCGCCGATTAGTTGCTTTCGCTGTGTCCCTTGGGCAACCGTTTTCTTTTCATCACTGTAGGTTAGACCCTGACGAAACCTTTCGACCTTCTTCTCTGAAACTTGTTCGTGGAGAGGCTTTGGTTTTCAACTGCATGCTGCACCTACCTCACCTCAGTTATCGGGCCCCGGACTCTGTCACTTCGTTCTTCAACGGTGCGAAGGCGCTGGGTCCGAAGCTAGTGACGGTGGTGGAAGAAGAGGTGGGGCCCGTTGAAGGGGAAGCGGGCTTTGTAGGGAAGTTCATGGAGTCTTTGCAGCACTACTCGGCAGTGTACGATTCGCTGGAGGCGGGGTTTCCGATGCAGAGTCGGCCCCGGGCTCTCGTGGAGAGGGTTTTCTTGGGCCCGAGAATAGCGGGGTCGTTGGGGCGGCTATACTGGAGGGGTGGGGATGAAGAGAGAGAGTCGTGGGGGGAGTGGTTGCGTGCCGCGGGGTTCACCGGAGTTCCTATAAGCTTTTTTAATCATTGCCAAGCTAAGCTGTTGGTTAGTCTATTTAACGACGGGTATAGAGTGGAGGAATTTAGTAACAATAAATTGGTGTTGGGTTGGAAATCAAGGCGTTTGCTTTCAGCATCTATTTGGAATTATTCTATTTCAGAACCTTAA 1467 0.5535 MDMDMDGIPDSLDFSEHSTTTPTSDEDCNWDHLSPLVNWESFTTDNDDFHSLVGSIFDDARAAAILSQDHGYLEEASSFDDGSVSATEDKRGGCEYLKDLRLVHLLMAAAEALASATKSRDLARVILVRLKELVSSTQGSTMERLAAHFTDALQTLLEGACGGAHSATKHHPLQSGDHQQTDTITAFQLLQDMSPYVKFAHFTANQAILEAVAQERRVHVVDYDVAEGAQWASLMQAFVSHKEGSPGPHLRITALSRGGNSGRRSIATVQETGRRLVAFAVSLGQPFSFHHCRLDPDETFRPSSLKLVRGEALVFNCMLHLPHLSYRAPDSVTSFFNGAKALGPKLVTVVEEEVGPVEGEAGFVGKFMESLQHYSAVYDSLEAGFPMQSRPRALVERVFLGPRIAGSLGRLYWRGGDEERESWGEWLRAAGFTGVPISFFNHCQAKLLVSLFNDGYRVEEFSNNKLVLGWKSRRLLSASIWNYSISEP 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03215 488 Pfam GRAS domain family 102 481 IPR005202 -
Aip07g03215 488 ProSiteProfiles GRAS family profile. 93 482 IPR005202 -
Aip07g03215 488 PANTHER SCARECROW-LIKE PROTEIN 26 16 482 IPR030028 -
Aip07g03215 488 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 16 482 IPR005202 -
Aip07g03215 488 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03215 Aip-Chr7 120550969 120552435 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03215 100 482 GRAS Transcription Factor Family AT5G41920 34.805 3.88e-51 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aip07g03215 GRAS 1.6e-99 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03215 - - gmx:100787926 621.698