Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03188 ATGATGATGATTTTTTCTCTTGTTTTCAGGTTGGGATTCTTGATTGACTTCCTGTCCCATGCAGCTATTGTTGGTTTTATGGGGGGTGCTGCCATCACCATTGCCCTTCAACAACTTAAGGGCTTTCTTGGGATTCAAACAAAAAATTTCACAAAAAAAACTGATATTGTCAATGTGATGCATTCAGTAGTCTCCACAGCCCATCATGGATGGAATTGGGAAACTATACTCATTGGAGCAAGCTTCTTGGGTTTTCTTCTATTTGCCAAATTCATTGGAAAGAAGAATAAAAAGTTCTTCTGGGTGCCAGCAATTGCCCCATTGATATGTGTTATCTTGTCCACTTTTTTTGTATTCATAACACGTGCAGATAAACATGGAGTAGAAATTGTTAGAAACATTAAAAAAGGGATCAATCCTTCATCTGTTAAAGAAATATATTTCACCGGTGACTACCTTGGGAAAGGTTTTAGAATTGGTGTCATGGCAGGCATGATAGCACTAACTGAAGCTGTAGCAATTGGAAGAACATTTGCATCTGTGAAGGACTATCAACTGGATGGAAACAAAGAAATGGTAGCATTAGGAGCTATGAATGTTGTAGGTTCAATGACTTCATGTTATGTTGCAACTGGTTCTTTCTCTAGGTCAGCAGTGAATTTCATGGCTGGTTGTCAAACTGCAGTATCTAATATTGTGATGTCTGTAGTTGTGTTCTTAACCCTGGAATTCATCACTCCCCTTTTCCATTACACTCCAAATGCCATTCTTTCTTCAATCATCATTTCTGCTGTCATCAACCTTGTGGACTATCAGGCAGCTATTTTGATTTGGAAGATTGATAAATTTGATTTTGTTGCTTGCATGGGAGCATTCTTTGGTGTTGTTTTTGCCACTGTTGAGATAGGACTTCTAATTGCTGTTTCTATATCCTTTGCAAAGATTCTACTACAAGTTACAAGGCCTAGAACTTGTATTTTGGGGAAGATTCCTAGAACAACTGTGTATAGAAACATCCATCAATACCCAGAAGCTAGTAAGGTTCCAGGTGTACTTATTGTGAGAGTTGATTCTGCAATATATTTCTCCAACTCCAATTATGTCAAAGAAAGGATACTAAGATGGTTGATGGATGAAGAAGAACAAGGAAAAGGAGATTACCAAACAAGAATCCAGTTTTTGATTGTTGAAATGTCACCCGTTACTGACATAGACACCAGTGGCATCCATGCCCTTGAAGAGTTACACAGAAGTCTTGAGAAGAGAGATGTTGAGCTTGTTCTGGCAAATCCTGGCCCAGTGGTGATTGACAAGATTTACACATCAAAGCTTGCAAACATGATTGGTGAGAACAAGATCTTCCTCACAGTTGCAGAGGCAGTTGCATATTGTTCTCCAAAGCTAGCTGAGGACCCATGA 1419 0.389 MMMIFSLVFRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIQTKNFTKKTDIVNVMHSVVSTAHHGWNWETILIGASFLGFLLFAKFIGKKNKKFFWVPAIAPLICVILSTFFVFITRADKHGVEIVRNIKKGINPSSVKEIYFTGDYLGKGFRIGVMAGMIALTEAVAIGRTFASVKDYQLDGNKEMVALGAMNVVGSMTSCYVATGSFSRSAVNFMAGCQTAVSNIVMSVVVFLTLEFITPLFHYTPNAILSSIIISAVINLVDYQAAILIWKIDKFDFVACMGAFFGVVFATVEIGLLIAVSISFAKILLQVTRPRTCILGKIPRTTVYRNIHQYPEASKVPGVLIVRVDSAIYFSNSNYVKERILRWLMDEEEQGKGDYQTRIQFLIVEMSPVTDIDTSGIHALEELHRSLEKRDVELVLANPGPVVIDKIYTSKLANMIGENKIFLTVAEAVAYCSPKLAEDP 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03188 472 PANTHER SULFATE TRANSPORTER 8 472 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aip07g03188 472 SUPERFAMILY SpoIIaa-like 343 465 IPR036513 -
Aip07g03188 472 Pfam Sulfate permease family 3 289 IPR011547 GO:0016021
Aip07g03188 472 CDD STAS_SulP_like_sulfate_transporter 342 457 - -
Aip07g03188 472 Gene3D STAS domain 321 468 IPR036513 -
Aip07g03188 472 ProSiteProfiles STAS domain profile. 341 464 IPR002645 -
Aip07g03188 472 Pfam STAS domain 342 460 IPR002645 -
Aip07g03188 472 TIGRFAM sulP: sulfate permease 7 460 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aip07g03188 472 PANTHER HIGH AFFINITY SULFATE TRANSPORTER TYPE 1 8 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03188 Aip-Chr7 119934570 119939508 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03188 9 471 Inorganic Solute Cotransporters AT1G22150 77.322 0.0 710
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03188 K17470 - gmx:100797668 796.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03188 07 119934570 119939508 Aip07g03188 07 119934570 119939508 ECH