Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03184 ATGTCTTCGTCTTCGGCGGCTGCCGCAAACAATTCGCCGTGTGCGGCGTGCAAGATTCAGCGTCGGAAGTGCACACAGGAGTGCGTGTTCGCGCCATACTTCCCGCCGGACAACCCGCAGAGATTTGCGTACGTTCATAAGGTGTTCGGAGCAAGCAACGTGGCAAAACTCCTCAACGACCTGAACGCAGCTCAACGAGAGGATGCAGTGAAGTCGCTGGCATACGAGGCCGAGGCACGTCTCCGTGACCCCGTGTACGGTTGCGTAGGACTCATTTCACTTCTCCAGCACAAGCTCAAACAACTCCAGGCTGAACTTAACCATGCTAAGACGGAACTCGCAAACTACGTTGTCGTTAACAATAATAATAACGGTTCACCTCACGCGCCTGTTCTCCCGCTCTTTAACAACCAACACCATCAGCAACCTTCTCAACTGAATCGTAACAACCTCTCACATCACTCTCTGCAACCATTTTCTGTTTCTGTTTCCCCTTTTCAGGAGGTTGTTATGCAGCACCAGCAAGAGATTTTGGGGTTTGAGAATTATATGACGGTTGGTTCTTCTTCCGCTGCTTCTGCTGTCTCACCTTCGCTGGCTCTTGGACCGGTTGATCACAGTTTTCATCACCATCATCATAATCATCACCATAATCTGCAGCAGCAGATTCAGGCGCATCATCAATCTTTTATGTTTCAGAAGCAGGCAAAGTTCGAAGGCGAGGAGGTTCTAACATTTGTCAACCTAGGCTGCAGCAGCATCATAGTTTTACAAGTTGGAGGAGCAAAGAAACTATAA 798 0.4925 MSSSSAAAANNSPCAACKIQRRKCTQECVFAPYFPPDNPQRFAYVHKVFGASNVAKLLNDLNAAQREDAVKSLAYEAEARLRDPVYGCVGLISLLQHKLKQLQAELNHAKTELANYVVVNNNNNGSPHAPVLPLFNNQHHQQPSQLNRNNLSHHSLQPFSVSVSPFQEVVMQHQQEILGFENYMTVGSSSAASAVSPSLALGPVDHSFHHHHHNHHHNLQQQIQAHHQSFMFQKQAKFEGEEVLTFVNLGCSSIIVLQVGGAKKL 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03184 265 PANTHER LOB DOMAIN-CONTAINING PROTEIN 32-RELATED 10 230 - -
Aip07g03184 265 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 10 230 - -
Aip07g03184 265 Coils Coil 92 119 - -
Aip07g03184 265 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Aip07g03184 265 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03184 Aip-Chr7 119833624 119835303 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03184 8 159 AS2 family AT5G66870 61.250 8.83e-59 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aip07g03184 LOB 2.4e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03184 - - adu:107460830 439.499