Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03174 ATGGATGAAATTAAAATTTGTTGCACAGGGCCAAAGGAAGAGACCAACCGTGTTTTACGTGTTAGGGATCAAAAAATCCTCTTCCTCCTCGAGCCATTTCTGATTTTCCAGTTCCTCAGACTCTCTCAACTCTCAACCCTAGGTTATAGCCTTCGCCACCGCTGTAAGGAGAGACTCAGCGTCGCCGCCGTCCATTGTGCTCAGGGGCCATCGCCGCAGGGAGTGAGAAACTGCCATCGTTCGCTGGGTTGTGGTCGTGCTCCAAGCCTCCCCCTGTTCACTCTCACGGTCTCACCAATCTCAGCTTCTTCTTCGAGTTCGGTGTCCGACGTTGTCTTCTTCTACTCAGCCCCACTTCATATGGCTTCCCGTGGTGGCTCCGTAGACTGTGGAATAGGAACATTGTTTTTCTTCTTCTTAATTGTTTCGATGTGTTGGTTGCATGATGATGCAGAACTACATAGAACCCTAGCCCTCCAGCTCTCCATCCCCGCAGCCACCGCAGCCCCGCAACCACCGCATCCCCGCATCCCCCACAACCCCGCAGCCACGCTTCGTTGTCATAGCCGAACTCGTCTCCACTGGGTAGAGGCATCGCGTGCGGAAGCTCCGTCGCTTTCGCAGGAGCTGTGTCGCCGTTGTAGGAACCTCcgtcgtctcttctgttcgagctctatctctttgtgtttgccggtgtcgtcgtctcctctgtcgtctccatcactccccttccttctcgctgccgTAGGTGGTGTCCTCTTTGCCCTTGAAGAGGCAGCTTCATGGTGGAGGAGTGCTCTTTGGTGGAGGACATTTTTCACCACAGCAGTAGTTGCTATTGTTTTAAGAGCTGCAATTCAGCTTTACGCCACCAGGAAATGCGGCTTATTCGGAGAAGGTGGTCTGATAATGTATGATGTTGGTTCTTCCCAAGGTAACATACAGCGCCGGCGACTTACTAGCAGCAATACTATTGGGGGTCATTGGAGGAGTTCTTGGAATTAA 1005 0.4726 MDEIKICCTGPKEETNRVLRVRDQKILFLLEPFLIFQFLRLSQLSTLGYSLRHRCKERLSVAAVHCAQGPSPQGVRNCHRSLGCGRAPSLPLFTLTVSPISASSSSSVSDVVFFYSAPLHMASRGGSVDCGIGTLFFFFLIVSMCWLHDDAELHRTLALQLSIPAATAAPQPPHPRIPHNPAATLRCHSRTRLHWVEASRAEAPSLSQELCRRCRNLRRLFCSSSISLCLPVSSSPLSSPSLPFLLAAVGGVLFALEEAASWWRSALWWRTFFTTAVVAIVLRAAIQLYATRKCGLFGEGGLIMYDVGSSQGNIQRRRLTSSNTIGGHWRSSWN 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03174 334 PRINTS Plant CLC chloride channel signature 273 283 IPR002251 GO:0005247|GO:0006821|GO:0016020
Aip07g03174 334 PRINTS Plant CLC chloride channel signature 291 298 IPR002251 GO:0005247|GO:0006821|GO:0016020
Aip07g03174 334 PRINTS Plant CLC chloride channel signature 259 267 IPR002251 GO:0005247|GO:0006821|GO:0016020
Aip07g03174 334 SUPERFAMILY Clc chloride channel 247 290 IPR014743 -
Aip07g03174 334 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 247 313 - -
Aip07g03174 334 Gene3D Clc chloride channel 245 314 - -
Aip07g03174 334 PANTHER CHLORIDE CHANNEL PROTEIN CLC-C 247 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03174 Aip-Chr7 119710624 119713818 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03174 249 310 Ion Channels AT5G49890 74.194 1.62e-23 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03174 K05016 - gmx:100777170 105.531