Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03166 ATGGACATATTTGACACATTCCCACAAGTTAGCATGTGGGGTGACAACTTTAAGGTTGATGGTGGCCTCATAAATTCAATCACTTCTCCAATGTTGTTGGTGAGCACTAGCACCATGGCCATGGATAACAAGCCTGAATATGTTCCACATGAATTGAGGGAACAATCTAGACAAAATCAAGAGGCTACCAATAAAGATGTTAGTAAGGTAATGAAATTTCATAAGAGTGCTTATGTTCAACAATTAGAAACAAGCCGTTTGAAGCTCATGCAATTGGAGGAGGAGATTGTTAAAGCTAAAAAGCAGAGTATGTATATTGGAAACAATCCATTGGATGCTAGTTATATGGGATCTTCTGGATCATTAAACTCAGGGATTGTTTTGTTTGAAATTGAATATGGAAATTGGATTGAAGAGCAACACAAACTGAATGAAGAACTCAGAAATGCATTCCAAACTCAAGCACCTGATGAACAACTTAATCAACTTATTCAGACTCTGTTGAATCATTACTCAAATCTTTTCAAGATGAAATCAGATGCTGCAAAGGCTGATATATTCTACCTAATCAGTGGTGTCTGGAAATCATCCGCGGAGCGCCTTTTCCTTTGGATTGGAGGATCTCGCCCTTCGCAGCTTCTAAGTATCATTGTGCCACAGCTTGAACCTTTAACTGAACAACAAACTGCTAGCATTAGCAGACTCCGGCTATCGTCGCAACAAGCTGAAGATGCTCTCTCACAAGGACTAGATAAACTCCAGCAGAGTCTTGTCCACAACATTGCAGTTGATCCATTGGTAGCAGGAAACTTTGGGTTTCAGATGGCTGATTCCATTGAGAAAATTGAGGGACTTGAAGGCTTCCTTAACCAGGCAGATCATCTTAGGCAACAGACATTGATACACATGTCAAGGATCCTAACAACACATCAAGCTGCTCAAGGATTGCTGGCTTTGGGGCAATACTTGCAAAGACTTCGTTCTCTCAGTTCTCTTTGGGCTTCTCAGCTTCCAAAATTTCACCGGAACATTATGAGCAATTTGATAACCCTGTGTAGGCCTCACACACTGTTCTTCTCTTCTTTCATTACTTGCAGACACCAGTTTCAAACCAGGGCTTCTTCTTTTCGGAACCCTAATTGCAATTCCCGTTTTCCCTCTTTCTCGTTATACTCTTCCTGGCTCATCGATTCCTGGGGTTCTAGCAGGACTGGACTATGGTTTCGCGTTAATCAGAGGAGAACTCTGGCCAAGGCTTCAAATTGGGACGAACAACGATCCCCGTATGAAACCCTTGAATTGGACAGAGATGCTGATGAAGAACAGATAAAGAGCGCTTATCGACGATTGGCTAAATTCTATCATCCAGATGTCTATGATGGTAGAGGATCCCTTGAGGAAGGTGAAACAGCAGAAGCTAGGTTCATTAAGATCCAAGCTGCTTATGAATTGCTTATAGACGATGAGAAACGAAGACAGTATGATATGGATAACCGAGTCAACCCTATGAAGGCGTCTGAGGCATGGATGGAGTGGCTAATGAAAAAGCGAAAAGCTTTTGCTCAACGTGGTGATATGGCAGTTGCTGCTTGGGCTGAGCAGCAACAGCGACAGTTGAATCTACGTGTCCGTCAACTTTCTCGTTCAAAGATGGATCCTGATGAGGCAAGGAAGATTCTAGCTAGAGAGAAGGCAGCTGCTGCTAAGAATTTCTCCAATACCCTTAAAAGGCACACACTTGTTCTCAAGAAAAGAGATTTGATGAGAAGAAAGGCTGAGCAAGATCAAGATAAACTTATCAGCCAGCTCTTGGCAGCAGAAGGTCTTGAATCAGATACTGATGAATGA 1848 0.4232 MDIFDTFPQVSMWGDNFKVDGGLINSITSPMLLVSTSTMAMDNKPEYVPHELREQSRQNQEATNKDVSKVMKFHKSAYVQQLETSRLKLMQLEEEIVKAKKQSMYIGNNPLDASYMGSSGSLNSGIVLFEIEYGNWIEEQHKLNEELRNAFQTQAPDEQLNQLIQTLLNHYSNLFKMKSDAAKADIFYLISGVWKSSAERLFLWIGGSRPSQLLSIIVPQLEPLTEQQTASISRLRLSSQQAEDALSQGLDKLQQSLVHNIAVDPLVAGNFGFQMADSIEKIEGLEGFLNQADHLRQQTLIHMSRILTTHQAAQGLLALGQYLQRLRSLSSLWASQLPKFHRNIMSNLITLCRPHTLFFSSFITCRHQFQTRASSFRNPNCNSRFPSFSLYSSWLIDSWGSSRTGLWFRVNQRRTLAKASNWDEQRSPYETLELDRDADEEQIKSAYRRLAKFYHPDVYDGRGSLEEGETAEARFIKIQAAYELLIDDEKRRQYDMDNRVNPMKASEAWMEWLMKKRKAFAQRGDMAVAAWAEQQQRQLNLRVRQLSRSKMDPDEARKILAREKAAAAKNFSNTLKRHTLVLKKRDLMRRKAEQDQDKLISQLLAAEGLESDTDE 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03166 615 CDD DnaJ 428 487 IPR001623 -
Aip07g03166 615 SUPERFAMILY Chaperone J-domain 380 494 IPR036869 -
Aip07g03166 615 PRINTS DnaJ domain signature 429 447 IPR001623 -
Aip07g03166 615 PRINTS DnaJ domain signature 447 462 IPR001623 -
Aip07g03166 615 PRINTS DnaJ domain signature 470 490 IPR001623 -
Aip07g03166 615 PANTHER FACTOR TGA7, PUTATIVE-RELATED 1 403 - -
Aip07g03166 615 SMART dnaj_3 426 490 IPR001623 -
Aip07g03166 615 Gene3D DnaJ domain 412 540 IPR036869 -
Aip07g03166 615 Coils Coil 75 102 - -
Aip07g03166 615 Pfam DnaJ domain 428 495 IPR001623 -
Aip07g03166 615 Pfam Seed dormancy control 145 218 IPR025422 GO:0006351|GO:0043565
Aip07g03166 615 Coils Coil 429 449 - -
Aip07g03166 615 ProSiteProfiles DOG1 domain profile. 126 336 IPR025422 GO:0006351|GO:0043565
Aip07g03166 615 ProSiteProfiles dnaJ domain profile. 427 498 IPR001623 -
Aip07g03166 615 ProSitePatterns Nt-dnaJ domain signature. 475 494 IPR018253 -
Aip07g03166 615 PANTHER TRANSCRIPTION FACTOR TGA9 1 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03166 Aip-Chr7 119594670 119600071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03166 62 341 Calmodulin-binding Proteins AT1G22070 54.965 5.47e-104 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03166 - K14431 ahf:112766429 491.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03166 07 119594670 119600071 Aip07g03166 07 119594670 119600071 ECH