Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03154 ATGCCTCGCCGTAGTGCTCCGTCCTCATCATTGCCGCCGAGGCCAACACCAATTCCCGCCAAATTCTGGCGCGCATGTGCTGGAATCTCTGCACAGGCACCAGTAGTGAACTCTAGGGTTTACTACTTCCCACAGGGACACATCGATCAAGCTGCTTCGCAACCGCGAAACCTTTCACCTCTCGTTTACTCCAGGCCGGTCATCCCTTGCCGTGTCTCCGCCGTCAACTACTTCGCGGACCCTAACACCGACGAGGTCTTCCTCAAGATTCTTCTTCTTCCTGTTACCGATGGATCCGCTCAAGATTTTCTTCCGCCTGCCGTCGCCGCCGAAGGCAACAGCGGCAACGGCAATGGCGACGATGAAGAGGTTGCGTCTTACGCCAAGATTCTCACGCGGTCCGATGCGAATAATGGTGGAGGGTTTTCGGTGCCGAGATCCTGTGCGGACTTGGTCTTCCCGCCGTTGAACTTTGAAGAGGACCCGCCGGTGCAGAACCTTAGAATAACCGACCTCCACGGCGCCGTATGGGAGTTTCGCCACATCCACCGCGGGACTCCGAGACGGCACCTCTTCACATCTGGCTGGAGCAAGTTCGTTAACAGCAAGAAGATTATCTCCGGCGATACCGTGGTTTTCATGAAGGACTCCGATGGGAGGATGTTCGTGGGGCTCCGCCGCAATATGTCGCTGGACGATGATATCTCAGATGGAGGATTGGATTGGTGTGAAGCTATCGTCGGGATGGACGCAGGCAAAGAAGAAAAAGAAGAGAAAGAAGAAGAAGAGGTGATGACGGAGGGATTTGCAAGAAACGGGAAGGGGAGAGTGACTTCGACATCTGTGGCGGAGGCGATGGAGCTGGCGGCGCAAAACAAGCCGTTCGAAGTTGTTTACTATCCAAGCGTAGGTTGGGGGGAGTTTGTGGTGAAGGCGGAGGACGTGGACGCGATGATTAATGGTATTCCCTGGAGTGTTGGGATGAGAGTGAAAATGGGCAGAGAGAACTATGATTCGTCACGGATGGATTGGTTTCAGGGAACTGTTTCTGGTGTTACTGTTCCCGGTAAAGATCAACCATGGAGTGGTTCTCCTTGGCGCATGCTTCAGATTACATGGGATGAATCCGAGATTTTGAAGAATGTAAATCCTGTCAGTCCATGGCAGGTGGAACTTCTTTCTGAGACACTTTTACTTCCTCAAATATTTCTCCCAACAAAGAGGTTCAGAACTACAGATGGTTCTGGAGTATTCATTAATGAAATGGGAGAATCCTCCTCTTCCATTTCAAGATTTTCTATTCCTGATTCAACAATGGGATTGCTGAATCAAACATTGTTGAGTAATTATGATACTCTTTTTTCTGCTAGCATGCAGGGAGCCAGGCATCCTCTATTTTCTGCAGCTACTTATCCCCTCTTTCCGATTGATCCTTCTCTGTCTATTGATAGTTCCTTTGAGAATAACATTGTACCAAAGTTAAATGTTATGTTGCCAAAACTTAACATTGACACTCATAAACCTAAAAACTTATCACCACATAGCAAGTCTAGTTTGACTCCCATTGATGAGACCCCTAACACCAACTCAACCAAATCTGGAGCTACTTCATTTCAGTTATTTGGTTGTACTATTCAAACAGATCAAGCTTCTGATAAAATTGATGACCATAACAATGTTGAAGGAGAAGACAACATACAATAA 1704 0.4824 MPRRSAPSSSLPPRPTPIPAKFWRACAGISAQAPVVNSRVYYFPQGHIDQAASQPRNLSPLVYSRPVIPCRVSAVNYFADPNTDEVFLKILLLPVTDGSAQDFLPPAVAAEGNSGNGNGDDEEVASYAKILTRSDANNGGGFSVPRSCADLVFPPLNFEEDPPVQNLRITDLHGAVWEFRHIHRGTPRRHLFTSGWSKFVNSKKIISGDTVVFMKDSDGRMFVGLRRNMSLDDDISDGGLDWCEAIVGMDAGKEEKEEKEEEEVMTEGFARNGKGRVTSTSVAEAMELAAQNKPFEVVYYPSVGWGEFVVKAEDVDAMINGIPWSVGMRVKMGRENYDSSRMDWFQGTVSGVTVPGKDQPWSGSPWRMLQITWDESEILKNVNPVSPWQVELLSETLLLPQIFLPTKRFRTTDGSGVFINEMGESSSSISRFSIPDSTMGLLNQTLLSNYDTLFSASMQGARHPLFSAATYPLFPIDPSLSIDSSFENNIVPKLNVMLPKLNIDTHKPKNLSPHSKSSLTPIDETPNTNSTKSGATSFQLFGCTIQTDQASDKIDDHNNVEGEDNIQ 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03154 567 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 15 561 IPR044835 GO:0003677|GO:0006355|GO:0009725
Aip07g03154 567 MobiDBLite consensus disorder prediction 512 534 - -
Aip07g03154 567 MobiDBLite consensus disorder prediction 505 534 - -
Aip07g03154 567 SUPERFAMILY DNA-binding pseudobarrel domain 123 233 IPR015300 -
Aip07g03154 567 Pfam B3 DNA binding domain 128 228 IPR003340 GO:0003677
Aip07g03154 567 PANTHER AUXIN RESPONSE FACTOR 15 561 - -
Aip07g03154 567 CDD B3_DNA 126 227 IPR003340 GO:0003677
Aip07g03154 567 SMART B3_2 127 229 IPR003340 GO:0003677
Aip07g03154 567 Pfam Auxin response factor 285 370 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Aip07g03154 567 ProSiteProfiles B3 DNA-binding domain profile. 127 229 IPR003340 GO:0003677
Aip07g03154 567 Gene3D - 324 397 - -
Aip07g03154 567 Gene3D - 124 229 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03154 Aip-Chr7 119417243 119419354 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03154 22 552 B3 DNA Binding Superfamily AT1G77850 42.936 1.70e-132 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Aip07g03154 B3 7.9e-20 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03154 - - aip:107607845 1098.19