Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03150 ATGTTCTGGCTATTGTGCACGTTGTTGTTGCCGGCGATGACCAGTTCTGGCCGATGTCAACGGAGGAAGGACATGGCGGCTTCTGGGGCTCAACAACGGGGAGATTCCGCCGAGGCGAGGCCGTCACCGGTGGATTCTCCGGCGGAATTGCCGGGAACCTCTGAGGATTCTGCCGTGTACGAAATTGACTACTTTTCTCAGGCAAGGAAGGCGCTGAGCGAACGTTCCCCTTATGAAGAAGAAGCGTCCACTTCTGGGGTGGTTACTCTGCCAAGTGGGTTATCTAGTTTGTTGAACCGCCATGGGGATAACCGTCGGCGGCACAAGAAGGTTCGGTCCGGGGGCGAGAAGAAGAAGAAGAAATCATCTAGGGCGAGCGAGAAGGCACGTGCTTTCAACATTTGGGACGAGACTGAGGAGTATTTTAGGGACTTATCATTGAGTGATATCGATACCTTAGTGGAGCTTTCTTCGCTGTCTAGGTTATGTTCTCGTCAGTGTTTCTCGATTCCGGTTTTGGGGAATTCTCCGAGACTCGATATAGTAGTTAATAGTAGTGAGGATGACAAGAAAGATGCAATAAAACTGGACTTAGATAGTGGCGAGGATGATAAAAAGGTTGAGGAAGACTTGGGAAGTGAGGAATGTACATTGGGAGTGGAGTCAATTGACAATGCCGCTGCCGAAAACGATTTGCCTCAGGATGATGGAAAAAATGTCTCGTGTGTTAGTTTAGAGTGGCTATTAGGTTGTAGGAGTAAGGTTTCTTTGACTTCTGAGCGCCCTACAAAGAAAAGGAAGCTTTTGAGTGGGGATGCTGATTTGCAGAAAGTTCAAATGACCATTCCTCGTGATGGGGATGAACCCTTTTGTCATTATTGTGGCATGGGGGAGACAGGCAGAGATTTGAACCGTTTGGTTGTTTGTGCCTCTTGTAAAATGGCAGTTCATCAGAAGTGCTATGGTGTGCAAGATGGCGTGGATGAGTCTTGGTTGTGCTCGTGGTGTAAGCTAAAGCGAGGTGTCGAGGGGTCGGTGAATCCTTGTGTGCTTTGCCCGAATAAAGGTGGTGCTTTGAAACCAGTTGATAGCACTGTGGAAGACGTTGAGTCTGTGCAGTTTGTGCACTTGTTTTGTTGTCTGTGGATGCCCGAGGTTTATGTAGATGATTTGAAGAAGATGGAGCCTGTTATGAACGTCGGGTCAATAAAGGAAACCCGGAGAAAATTAGTGTGTAATATTTGCAAACTGAAGTGGGGTGCATGTGTTCGTTGTAGCCATGGAACCTGCAAGACTTCTTTCCATCCGTTATGTGCAAGGGAAGCTCGACATAGGATGGAGGTGTGCGCAAAGTATGGAGATGATAATGTTGAGTTGCGGGCTTTTTGCTTGAAACACTCAGATTTACAAGATAATAGGGGCATCTTGCCATTAGGAGACTCCCTTTCTATTGGCAATACTTTTTTTGAAGCTAATGGCCTTCCAGTAAATAGCGAACACAAGTTGAAAATTGGATGTGGTAGTCCCAATAAGTTGAACCACAATGGACTGCAAGATAATGTTGGAATGGTAGGGAGGACGATTGAGAATGGTGTTGCATCTGACTCCACCAGTTTTGCACTTATTTTAAAGAAGTTGATAGACCGGGGAAAAGTTGATGCAAAGGATGTAGCAATGGAGATTGGCATTTCACCAGATTCATTAATTGCAAATATTAATGAAGCTTATATGGACCCTGATGTGGTTGACAAAATCGTCAATTGGCTGAAAGCTCATGTATACACTACTGCATTTCACAAAGGTTTAAAAGTCAAATTCAAACCACCGATTCCTTCCAAGGATGAAAGTGGAGCTGCAGAAGGTTCTGTTGCTCTTCCAACATCTGATTCAGGTTCGTTGGATCCTGTTGCTGTTAAGTCAGTACCTCCAAGGAGGAGAACTGTCAGCAACATTAGGATTTTGAAGGATAATAAAGTGATATGTTCATCCGAGGGGGTTACTAGTGAGAATGGGATGTCAAAAGACAAGTTCAGAGCTGATCAGTTAGACCATGAAAATCCAGGAAGTTCTAATGGAGGGTCTCCAGATGCTACTGTGGTGGACTTAACCAAGCCTGAGGATATGTTATCGAAAGTTCAAGGGAATGAAGATAAACCACACAAAACCAACTTATCTGAATGTGTTTCAGAAGAAATGTCCAAGCTTTATTCGCAGAATGCTTCTATGTTTTCTGATCGCTACTGTCCTCTCTATTCTGCTGTGAAACTTCTTGATTGTGGTTCCATAAAGGTGGAAGCCAGCTCTAGCTACATTCACCCATCCATTGAGAAGTTGCTACAGATTCATAATGGGGAATTAATGTGCACTGGTATTTCCAAGCCTGATGAAGGAAATATGGAGCAGTTGCATAGCTCTGGAAAAATGGAACTTTTGGAATCTTCTCCAGAAGATGAAGTGGAGGGGGAACTTCTATTTTTACAGCATAGATTATTGCGGAATGCAGTTGCAAGAAAGAAGTTTACTGATAACTTAATCTCCAATGTGGCAAAGAGGTTGCCGCAGGAGATTGATGCAGCGCATCAGCGAAGGTGGGACTCTGTGATTGTTAATCGATATCTGCGTGATCTTAGGGAGGCAAAAAAGCTAGGTAGGAAAGAAAGAAAGCACAAGGAAGCCCAAGCTGTTCTGGCTGCTGCAACTGCTGCTGCTGCGGCATCTTCTCGGGTTTCTTCCTTCCGAAAAGACTCTCTAGATGAATCTATGCAACAAGAGAATTTGTTGAAGTTGGATGCTTTAAGTGGGAGGAATGGTGCTGGTTCTCAGCCAATGCCAAGAGCTAAAGAGACACTTTCAACAGTAGCTGTGACAAGAACGTCATCAGAGAAATATTCTGATTTCAGCTTGCCAACCTCAGAATATTCTAAGGAGCAATCTAAATCATGTGATATCTGCAGACGATCTGAGACTTTGTTTAATCCCATCCTTGTCTGCTCTGGTTGCAAGGTTGCAGTGCATTTGGACTGTTATCGTAGTGTGAAAGAAACTACTGGCCCATGGTACTGTGAATTATGTGAAGATGTAACATCTAAAAGCTGTGCAACATCTGCTATCAATTTCTGGGAGAAGCCTTATTTTGTTGCAGAATGTGCCCTTTGCGGTGGTACTACTGGAGCTTTTAGGAAATCTTCTGATGGTCAATGGATTCATGCCTTCTGTGCTGAGTGGGTTTTCGAGTCAACATTCAGAAGAGGCCAAATAAATCCAGTTGAAGGAATGCAGTCTGCGCTGAAGGGAGTTGACAAATGTTGCATTTGCCACCGCAAGCATGGTGTTTGTATGAAGTGTTGCTATGGCCATTGTCAAACCTCATTCCATCCATCATGTGCTAGAAGTGCTGGTTATTACATGATTGTGAGGACTACTAGTGGCAAACCACAACACAAGGCTTACTGTGAAAAGCACAGTTTGGAGCAAAAGGCAAAGTCTGAAAAACATGGAATCGAAGAGCTTAAAAGTATGAAGCAAATCCGGGTTGAACTGGAGAGATTACGTCTCCTCTGTGAGAGGATTGTCAAACGTGAAAAATTAAAGCGTGAATTGGTTCTTTGCTCGCATGACATACTTGCCTTCAAAAGAGATCATGTTGCTAGGTCTGTGCTTGTTCATAGCCCTTTCATCCTTCCGGATGGTAGTTCAGAATCAGCTACAACATCCCTTAGAGGAAACACAGAGGGATACAGATCATGCAGTGAAGCAATCCAAAGATCTGATGACATAACTGTGGACAGTTCAGTTTCAGATAAGCACCGTCTGAGAGCTGCTGTATCCATGGACACTGATCCCAAATTGGATGATGACTGCTCAACCTCACAAAGCCGCTATAATCACAAGATCCCAGATAGGGTTCAATTTTCTGGCAAGCAGATTCCTCGAAGAGCTTATGCCGTGGCACGCAATGTTTCAGATGAGAGTGGCGGATTGAGATCCAAATCTAGAAAGCATGCCGACACATTTGGAAAAGAGCTCGTTATGACGTCTGACGAAGCGTCTATGAAGAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCTGTCAAATGATAAGCAGTGTAAGGAGAATGTTTAAGCTAGTCAACCAGTGGAAAATTACCGGTGAAAGTATTGCTTCACAGCCTGGTTGGGCATTTGCCCTTGTGGCTGACATCCACCGTATTTGGTGCCAAAGCCATTTGCATCTGGATATATGA 4290 0.4357 MFWLLCTLLLPAMTSSGRCQRRKDMAASGAQQRGDSAEARPSPVDSPAELPGTSEDSAVYEIDYFSQARKALSERSPYEEEASTSGVVTLPSGLSSLLNRHGDNRRRHKKVRSGGEKKKKKSSRASEKARAFNIWDETEEYFRDLSLSDIDTLVELSSLSRLCSRQCFSIPVLGNSPRLDIVVNSSEDDKKDAIKLDLDSGEDDKKVEEDLGSEECTLGVESIDNAAAENDLPQDDGKNVSCVSLEWLLGCRSKVSLTSERPTKKRKLLSGDADLQKVQMTIPRDGDEPFCHYCGMGETGRDLNRLVVCASCKMAVHQKCYGVQDGVDESWLCSWCKLKRGVEGSVNPCVLCPNKGGALKPVDSTVEDVESVQFVHLFCCLWMPEVYVDDLKKMEPVMNVGSIKETRRKLVCNICKLKWGACVRCSHGTCKTSFHPLCAREARHRMEVCAKYGDDNVELRAFCLKHSDLQDNRGILPLGDSLSIGNTFFEANGLPVNSEHKLKIGCGSPNKLNHNGLQDNVGMVGRTIENGVASDSTSFALILKKLIDRGKVDAKDVAMEIGISPDSLIANINEAYMDPDVVDKIVNWLKAHVYTTAFHKGLKVKFKPPIPSKDESGAAEGSVALPTSDSGSLDPVAVKSVPPRRRTVSNIRILKDNKVICSSEGVTSENGMSKDKFRADQLDHENPGSSNGGSPDATVVDLTKPEDMLSKVQGNEDKPHKTNLSECVSEEMSKLYSQNASMFSDRYCPLYSAVKLLDCGSIKVEASSSYIHPSIEKLLQIHNGELMCTGISKPDEGNMEQLHSSGKMELLESSPEDEVEGELLFLQHRLLRNAVARKKFTDNLISNVAKRLPQEIDAAHQRRWDSVIVNRYLRDLREAKKLGRKERKHKEAQAVLAAATAAAAASSRVSSFRKDSLDESMQQENLLKLDALSGRNGAGSQPMPRAKETLSTVAVTRTSSEKYSDFSLPTSEYSKEQSKSCDICRRSETLFNPILVCSGCKVAVHLDCYRSVKETTGPWYCELCEDVTSKSCATSAINFWEKPYFVAECALCGGTTGAFRKSSDGQWIHAFCAEWVFESTFRRGQINPVEGMQSALKGVDKCCICHRKHGVCMKCCYGHCQTSFHPSCARSAGYYMIVRTTSGKPQHKAYCEKHSLEQKAKSEKHGIEELKSMKQIRVELERLRLLCERIVKREKLKRELVLCSHDILAFKRDHVARSVLVHSPFILPDGSSESATTSLRGNTEGYRSCSEAIQRSDDITVDSSVSDKHRLRAAVSMDTDPKLDDDCSTSQSRYNHKIPDRVQFSGKQIPRRAYAVARNVSDESGGLRSKSRKHADTFGKELVMTSDEASMKNXXXXXXXXXXXXXXXXXXXXXXXXVCQMISSVRRMFKLVNQWKITGESIASQPGWAFALVADIHRIWCQSHLHLDI 1429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03150 1429 CDD ePHD 1049 1154 - -
Aip07g03150 1429 MobiDBLite consensus disorder prediction 102 119 - -
Aip07g03150 1429 PANTHER PHD FINGER PROTEINS 241 471 - -
Aip07g03150 1429 MobiDBLite consensus disorder prediction 75 123 - -
Aip07g03150 1429 Pfam PHD-zinc-finger like domain 1048 1154 - -
Aip07g03150 1429 Pfam PHD-zinc-finger like domain 348 466 - -
Aip07g03150 1429 ProSiteProfiles Zinc finger PHD-type profile. 978 1027 IPR019787 -
Aip07g03150 1429 MobiDBLite consensus disorder prediction 605 641 - -
Aip07g03150 1429 Coils Coil 1351 1353 - -
Aip07g03150 1429 ProSitePatterns Zinc finger PHD-type signature. 981 1024 IPR019786 -
Aip07g03150 1429 Coils Coil 1173 1193 - -
Aip07g03150 1429 MobiDBLite consensus disorder prediction 78 99 - -
Aip07g03150 1429 PANTHER PHD-FINGER DOMAIN CONTAINING PROTEIN FAMILY-RELATED 797 1354 - -
Aip07g03150 1429 ProSitePatterns Zinc finger PHD-type signature. 291 336 IPR019786 -
Aip07g03150 1429 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 968 1030 IPR013083 -
Aip07g03150 1429 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 277 341 IPR013083 -
Aip07g03150 1429 MobiDBLite consensus disorder prediction 665 722 - -
Aip07g03150 1429 Pfam PHD-finger 304 337 - -
Aip07g03150 1429 Pfam PHD-finger 992 1025 - -
Aip07g03150 1429 ProSiteProfiles Zinc finger PHD-type profile. 288 339 IPR019787 -
Aip07g03150 1429 ProSiteProfiles Extended PHD (ePHD) domain profile. 346 467 IPR034732 -
Aip07g03150 1429 PANTHER PHD-FINGER DOMAIN CONTAINING PROTEIN FAMILY-RELATED 241 471 - -
Aip07g03150 1429 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1046 1156 IPR013083 -
Aip07g03150 1429 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 344 469 IPR013083 -
Aip07g03150 1429 PANTHER PHD FINGER PROTEINS 797 1354 - -
Aip07g03150 1429 ProSiteProfiles Extended PHD (ePHD) domain profile. 1046 1155 IPR034732 -
Aip07g03150 1429 SUPERFAMILY FYVE/PHD zinc finger 279 339 IPR011011 -
Aip07g03150 1429 MobiDBLite consensus disorder prediction 21 56 - -
Aip07g03150 1429 SUPERFAMILY FYVE/PHD zinc finger 970 1025 IPR011011 -
Aip07g03150 1429 SMART PHD_3 411 467 IPR001965 -
Aip07g03150 1429 SMART PHD_3 1101 1155 IPR001965 -
Aip07g03150 1429 SMART PHD_3 980 1025 IPR001965 -
Aip07g03150 1429 SMART PHD_3 290 337 IPR001965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03150 Aip-Chr7 119367975 119377816 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03150 285 469 C2H2 Transcription Factor Family AT3G14740 29.843 6.08e-17 82.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Aip07g03150 zf-HC5HC2H_2 2.4e-23 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03150 - - aip:107606101 2662.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03150 07 119367975 119377816 Aip07g03150 07 119367975 119377816 ECH