Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03133 ATGGAGGATTTGCAGAGTGTTCTTTTGGATCGCAACTTAACAGTTTCCAGTGTCCCAGAAAAGGGTCGTTCCCTCTTTGAATTGAAATGCGGGATTTTGGTGTTTGCAGGGGAGGTAATCATAAGTCAAGAGCCTTATGTTTGTGTTCCAAACAACAACTCAGTTCAGAAAAGGTGCGAAGGATGTTTTACAACAACTAACCTTAAGAAATGCTCACGGTGCCAAGTTGTGTGGTACTGTGGAACCTCTTGTCAGAAGTTAGAGTGGAAGTTTCATCGTCTTGAATGTGAGGTCCTCTCTCGGCTAGACAACGACAAGAAAAAATATGTCACACCATCCATTCGATTGATGGTTAAACTTTATCTTCGAAGGAAGCTGCAAAATGAGAAGATCATACCAAGCACTGTTATGGACAACTACAACTTGGTGGAGGCTTTAGTGTCTCACATGTCTGACATCACCAAGGAGCAACTGCTGCTGTATGCGCAGATGGCTAATCTAGTAAACGTGATACTACAGTGGCCTGAAATCAATATAAAAGAGATTGCAGAAAATTTTTCTAAGTTTGCATGCAATGCACATACCATTTGTGACAGCGAGTTGAGACCATTGGGAACAGGATTGTATCCGGTTATTTCCATTATCAATCACAGCTGCTTGCCCAATTCTGTGTTGGTTTTTGAGGGAAGGTCAGCGTCAGTTCGAGCTGTGCAACATGTTCCCAAAGGTAGTGAGGTACTAATAAGTTACATAGAGACTGCTGGAAGCACTATGACTCGACAGAAAGCTCTCAAAGAGCAGTACCTATTCAATTGTACATGTCCTCGCTGTTCTAAACTGGGCCAGTATGATGATATCCGAGAAAGTGCAATTCTAGAAGGATACAGATGTAAAAATGAAAAATGTGATGGTTTCTTGCTTCGTACTACTGATGGAAAAGGATTCCAATGCCAACAATGTGGTTTGGTTAGGGAAAAGGAAGAGATAAAGAAAACTGCAACCGAGATAAAATCACTATCAGAGGAAGAAGCTTCTAAGCTTTCATCTGCCGGCTATTATCAAGAAGCTATTTCCATATATAAAATGATTGAGAAACTGCAAACAAAACTCTATCATCCTTTCTCCATCAACTTGATGCGAACTCGAGAGAAGATTTTGAAGTCATTGATGGAGCTGGAACATTGGAGTGAGGCTTTAGCATACTGCAAATTGACCATACCAGTCTATCAAAGTGCATATCCAGCTATTCACCCTCTGCTCGGTTTGCAGTACTATACATGTGGAAAACTTGAATGGTATCTGGGAGAAACAGAGGAAGCCGTGAAATCACTGACCAAGGCAGTGGATATACTAAGGATTACTCATGGGACAAACACACATTTTGTGACGGAACTTTTGATGAAGTTGGAAGAAGCCCGTGCCGAAGCATCTTACAAATCTTCCTCTAAAGAGTAG 1455 0.4137 MEDLQSVLLDRNLTVSSVPEKGRSLFELKCGILVFAGEVIISQEPYVCVPNNNSVQKRCEGCFTTTNLKKCSRCQVVWYCGTSCQKLEWKFHRLECEVLSRLDNDKKKYVTPSIRLMVKLYLRRKLQNEKIIPSTVMDNYNLVEALVSHMSDITKEQLLLYAQMANLVNVILQWPEINIKEIAENFSKFACNAHTICDSELRPLGTGLYPVISIINHSCLPNSVLVFEGRSASVRAVQHVPKGSEVLISYIETAGSTMTRQKALKEQYLFNCTCPRCSKLGQYDDIRESAILEGYRCKNEKCDGFLLRTTDGKGFQCQQCGLVREKEEIKKTATEIKSLSEEEASKLSSAGYYQEAISIYKMIEKLQTKLYHPFSINLMRTREKILKSLMELEHWSEALAYCKLTIPVYQSAYPAIHPLLGLQYYTCGKLEWYLGETEEAVKSLTKAVDILRITHGTNTHFVTELLMKLEEARAEASYKSSSKE 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03133 484 SMART set_7 11 257 IPR001214 GO:0005515
Aip07g03133 484 SUPERFAMILY SET domain 8 250 IPR046341 -
Aip07g03133 484 Gene3D Tetratricopeptide repeat domain 405 483 IPR011990 GO:0005515
Aip07g03133 484 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR1 1 476 - -
Aip07g03133 484 SUPERFAMILY TPR-like 345 450 IPR011990 GO:0005515
Aip07g03133 484 ProSitePatterns Zinc finger MYND-type signature. 59 96 IPR002893 -
Aip07g03133 484 ProSiteProfiles Zinc finger MYND-type profile. 59 96 IPR002893 -
Aip07g03133 484 Coils Coil 322 342 - -
Aip07g03133 484 ProSiteProfiles SET domain profile. 11 251 IPR001214 GO:0005515
Aip07g03133 484 Gene3D - 58 108 - -
Aip07g03133 484 Gene3D SET domain 36 277 IPR046341 -
Aip07g03133 484 Pfam SET domain 142 250 IPR001214 GO:0005515
Aip07g03133 484 Gene3D - 109 193 - -
Aip07g03133 484 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 1 476 - -
Aip07g03133 484 Pfam MYND finger 59 96 IPR002893 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Aip07g03133 SET 3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03133 K11426 - gmx:100789518 773.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03133 07 119062097 119066691 Aip07g03133 07 119062097 119066691 ECH