Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03123 ATGAAACCTTCCATAATATTTTCCTCTCTTCTAATCATCTTCCTCATCTTCACTGCCACTGCCACCATCTCAGGCTACACCTTCAAGGCAATCACTCCAAATTTCAGTGCCACATACCTCGAATTCATTGATGACTCTGGAACCTTCTTAATATCTCCAAACGGAACATTCAAGGCTGCAATATTCAACCCGGGTTCCCAGCAAACCAGCTTCTATCTCTGCATAATCCATGTTGCATCAAGAACCATCACTTGGTCCGCCAACCGCGGCCGCGCCGTCTCGAGCTCCGGCCAAATGAATCTAACTGTTAAAGGGATAACAATTTCTGATGAAAGTGGAAGGAATAATCCTGTATGGTCAACTCCACCATTGAGATCACAAGTTGGTAGGCTTGTCCTCACTGACATGGGTAACCTCCTACTCCTTGATCCTTCCAATGTTTCTCTTTGGGAAAGTTTTCGCTATCCAACCGACACAATTATCATCGGCCAGAGCTTACCTGTTGGATCATCTTTGTCAAGTTCTTCATCAGATTCAGACTTGTCCATTGGAAGCTACAACCTCACAATCACTTCCTCTGATGCAATCCTCCAATGGCTTGGACAGACATATTGGAAACTTTCAATGGACACAAAGGCGTATAGGAATTCATTAAGCATGGTGGAGTACATGGCTGTGAACAGAACAGGTTTCTACCTATTTGGAAGTAATGGAACGGTTGCTGTGTTTCTGGTAGGGTTACCGGAGTCGAATTTTCGAGTAGCTACATTGGATAACTCTGGCCATTTTGTGATCAAAAGTTTTTCTTCCGGAACCGGTTGGAAGCAGGAATTTCAAGGGCCAGATGATGGTTGTGGAACTCCCTTAGTTTGTGGCAGAGTTGGTTTATGCAATGATGATGATACCTCTTCTTCTTCTTCTTCTTCTTCATCATCATCATTACCTGTTTGTTCTTGTCCCCAGAATTTTCATGTAGGTTCAGGTAATTCTGGTGGTTGTGTTCCAAGCAACGGTTCTTATTCCTTTCCATATTCTTGTGATGGTTCTAATAATGATAGTTACCACAACAACAACCAATCAAATTCTTCTTCTTCAGTTGTTTCATTCTTGAATCTTGGAAATGGTTTGGACTACTTTCACAATATCTACACCGATCCTGTTATGGACAGTGTGGATTTATCGTTATGTCAGGATCAATGTTCCAAGAATTGTTCATGCTTGGGAGTCTTCTATAGAAACTCATCCGGTTCATGCTATGTGATTGAAAACGAGTTGGGGTCAATTTTGTCAAGTAACGATGGAGCCAATCAAGACATGTTTGGCTTCATCAAGGTCTCTATAGGATCCACAACCACCAATGATGATACGAGAGATGTTGAAGATGGCGGAGGAGGCTTTCCGGTGGTGGCCGCAGTGTTGTTGCCGATCACAGGCTTCGCTCTCTTGATGGCCTTTCTTTTCTTCTTGTGGAGAAGATCTATTAAAATTTCCAAAAGAAAACAAGATTTGGAACTCGGAAAACCCAACAATAATTATTCTCATTCTTCCGGGGACCTTGATGCCTTCTACATCCCGGGTTTGCCTCGAAGATTCGACTACGACGAACTCAAAAAGGCCACCGATGATTTCAAGACTCTGATCGGCTCCGGTGGTTTTGGTACGGTGTACAAAGGAGTTCTCTCCGACAATGCCGTCGTGGCGGTCAAGAAAATAGTCAACATAGGAGTTCAAGGGAAGAAAGACTTTTGCACAGAAATTGCTGTCATTGGAAACATCCATCATGTCAATCTTGTGAAATTAAAAGGCTTTTGTGTCCAAGGAAGGCATCGGTTTTTGGTGTATGAGTACATGAATCTTGGTTCCCTCGACCGAACGTTGTTCGGTGGAGGGCCACCATTGGAATGGCAAGAGAGATATGACGTGGCATTGGGGACGGCGCGTGGTCTTGCCTATCTTCATGGTGGGTGTGAGCATAAAATTATTCACTGCGATATCAAACCTGAAAATATTCTTTTGCATAATCATTTTCAAGTTAAGATATCGGATTTTGGATTATCAAAACTTCTTAGTCCCGAACAATCTGGATTGTTCACAACAATGCGAGGTACCCGTGGATACCTCGCTCCAGAATGGCTCACAAATTCTGCTATCACAGAAAAAACTGATGTGTATAGTTATGGTATGGTTCTTCTCGAACTTATAAGCGGAAGGAAAAATTGTTATTTTAAATCAAGAAGTCATAGTATAGACGAGGATAGTAATAGTGGCGGCCGAGGAGGAGGAGGTGGTCATAACTCTTCGTCATCTTCGACGTCAGGATTGCTTTATTTTCCTTTGTTGGCATTGGAGAAGCATGAAGAAGGGAACTACATGGATCTTGCTGATCCGAGACTAGAAGGGCGCGTGACGAACGAGGAGGTGGAGAAGCTTGTGCGGATTGCGTTGTGCTGTGTCCATGAAGAACCGGCGTTGAGGCCGAACATGGCGGCGGTTGTTGGGATGTTGGAAGGTGGTATGCCATTGCCGCAACCAAAGATGGAGTCTCTGAACTTTTTAAGGTTTTATGGTCGTAGATTTACGGAGGCTTCAATGATAATTGAGGAGAATAACGATAACGAAGGAGGAAGAAGAGAAGTGAATAATAATTCTTCATCAAGCATGACAAGTGGTGGCTCTCAAGCTGCTTTAGTTTCTTACATATCTTCACAGACTGTCTCAGGGCCAAGATAG 2730 0.4337 MKPSIIFSSLLIIFLIFTATATISGYTFKAITPNFSATYLEFIDDSGTFLISPNGTFKAAIFNPGSQQTSFYLCIIHVASRTITWSANRGRAVSSSGQMNLTVKGITISDESGRNNPVWSTPPLRSQVGRLVLTDMGNLLLLDPSNVSLWESFRYPTDTIIIGQSLPVGSSLSSSSSDSDLSIGSYNLTITSSDAILQWLGQTYWKLSMDTKAYRNSLSMVEYMAVNRTGFYLFGSNGTVAVFLVGLPESNFRVATLDNSGHFVIKSFSSGTGWKQEFQGPDDGCGTPLVCGRVGLCNDDDTSSSSSSSSSSSLPVCSCPQNFHVGSGNSGGCVPSNGSYSFPYSCDGSNNDSYHNNNQSNSSSSVVSFLNLGNGLDYFHNIYTDPVMDSVDLSLCQDQCSKNCSCLGVFYRNSSGSCYVIENELGSILSSNDGANQDMFGFIKVSIGSTTTNDDTRDVEDGGGGFPVVAAVLLPITGFALLMAFLFFLWRRSIKISKRKQDLELGKPNNNYSHSSGDLDAFYIPGLPRRFDYDELKKATDDFKTLIGSGGFGTVYKGVLSDNAVVAVKKIVNIGVQGKKDFCTEIAVIGNIHHVNLVKLKGFCVQGRHRFLVYEYMNLGSLDRTLFGGGPPLEWQERYDVALGTARGLAYLHGGCEHKIIHCDIKPENILLHNHFQVKISDFGLSKLLSPEQSGLFTTMRGTRGYLAPEWLTNSAITEKTDVYSYGMVLLELISGRKNCYFKSRSHSIDEDSNSGGRGGGGGHNSSSSSTSGLLYFPLLALEKHEEGNYMDLADPRLEGRVTNEEVEKLVRIALCCVHEEPALRPNMAAVVGMLEGGMPLPQPKMESLNFLRFYGRRFTEASMIIEENNDNEGGRREVNNNSSSSMTSGGSQAALVSYISSQTVSGPR 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03123 909 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 11 909 - -
Aip07g03123 909 Gene3D Transferase(Phosphotransferase) domain 1 617 841 - -
Aip07g03123 909 Pfam Protein kinase domain 544 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g03123 909 SMART blect_4 41 156 IPR001480 -
Aip07g03123 909 CDD B_lectin 46 156 IPR001480 -
Aip07g03123 909 ProSiteProfiles Bulb-type lectin domain profile. 35 154 IPR001480 -
Aip07g03123 909 MobiDBLite consensus disorder prediction 750 771 - -
Aip07g03123 909 Pfam D-mannose binding lectin 82 167 IPR001480 -
Aip07g03123 909 Gene3D Phosphorylase Kinase; domain 1 520 616 - -
Aip07g03123 909 PIRSF SRK 3 893 IPR024171 GO:0004674
Aip07g03123 909 Gene3D - 44 154 IPR036426 -
Aip07g03123 909 MobiDBLite consensus disorder prediction 876 893 - -
Aip07g03123 909 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 11 909 - -
Aip07g03123 909 ProSitePatterns Protein kinases ATP-binding region signature. 547 570 IPR017441 GO:0005524
Aip07g03123 909 ProSiteProfiles Protein kinase domain profile. 541 846 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g03123 909 SMART serkin_6 541 835 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g03123 909 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 207 IPR036426 -
Aip07g03123 909 CDD STKc_IRAK 547 837 - -
Aip07g03123 909 SUPERFAMILY Protein kinase-like (PK-like) 519 835 IPR011009 -
Aip07g03123 909 MobiDBLite consensus disorder prediction 868 893 - -
Aip07g03123 909 ProSitePatterns Serine/Threonine protein kinases active-site signature. 660 672 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03123 Aip-Chr7 118951439 118954336 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03123 524 844 Receptor kinase-like Gene Family AT5G20050 42.216 5.11e-76 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Aip07g03123 Pkinase 2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03123 - - ahf:112766506 1701.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03123 07 118951439 118954336 Aip07g03123 07 118951439 118954336 ECH