Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03110 ATGGTTAAGGCAGAAGAGAAGATCCAAAGAGAGACACCAATGAAGAATAATAAGCAGAAGAAGTACAAGGGAGTGAGAATGAGGAGTTGGGGATCATGGGTTTCAGAGATTAGAGCACCAAATCAGAAAACAAGAATATGGTTAGGTTCATATTCAACTGCAGAAGCTGCTGCTAGAGCCTATGATGCTGCACTTCTCTGTCTTAAAGGCTCTTCTGCAAATCTCAATTTCCCATTAACTTCTTCTAGTTACATTAACATCATCCCTCATCAAGATTCTTCTTCTTCTTCTTCTTCATCTGCTACTATGTCTCCAAAATCAATTCAAAGAGTTGCTGCTGCTGCTGCTGCTAATTGCACCTTTGTTGATGACATCAGCAACAATGCTAATGCTACAACACCTTCATCTTCTTCTTCTTCTTCTTCTTCATCATCATCATCATTGGTGTCATCACCATCAATGGTTTCATCTCCCTCTGAACAAACTACTGATGATGATGTTGTAGATGCAGCATCACTCATCATGTCTTCAACTACTACTAGCTGTGATGAATCCATGGCTATGATGGAAGAGCCTTGGTACAACACCTTTGATGATGCTCTTGATCAGATGCTGAGTGGTTTCTTTGACCTTGATTCATCTCAGCTTCTTGGTAATCTTTATGAAGAAGAAAGTGACATTCGTTTGTGGAGTTTCTGTTAG 702 0.3989 MVKAEEKIQRETPMKNNKQKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCLKGSSANLNFPLTSSSYINIIPHQDSSSSSSSSATMSPKSIQRVAAAAAANCTFVDDISNNANATTPSSSSSSSSSSSSSLVSSPSMVSSPSEQTTDDDVVDAASLIMSSTTTSCDESMAMMEEPWYNTFDDALDQMLSGFFDLDSSQLLGNLYEEESDIRLWSFC 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03110 233 Pfam AP2 domain 21 70 IPR001471 GO:0003700|GO:0006355
Aip07g03110 233 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF014 12 233 - -
Aip07g03110 233 SMART rav1_2 21 84 IPR001471 GO:0003700|GO:0006355
Aip07g03110 233 CDD AP2 20 78 IPR001471 GO:0003700|GO:0006355
Aip07g03110 233 MobiDBLite consensus disorder prediction 1 21 - -
Aip07g03110 233 MobiDBLite consensus disorder prediction 130 165 - -
Aip07g03110 233 PRINTS Ethylene responsive element binding protein signature 22 33 IPR001471 GO:0003700|GO:0006355
Aip07g03110 233 PRINTS Ethylene responsive element binding protein signature 44 60 IPR001471 GO:0003700|GO:0006355
Aip07g03110 233 ProSiteProfiles AP2/ERF domain profile. 21 78 IPR001471 GO:0003700|GO:0006355
Aip07g03110 233 Gene3D AP2/ERF domain 20 80 IPR036955 GO:0003700|GO:0006355
Aip07g03110 233 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 12 233 - -
Aip07g03110 233 SUPERFAMILY DNA-binding domain 21 79 IPR016177 GO:0003677
Aip07g03110 233 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03110 Aip-Chr7 118787116 118788134 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03110 22 232 AP2-EREBP Transcription Factor Family AT1G21910 46.919 8.58e-47 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aip07g03110 AP2 4.8e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03110 - - gmx:100813313 214.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03110 07 118787116 118788134 Aip07g03110 07 118787116 118788134 ECH