Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03081 ATGGCATCGGAGCTTCAATTGCCGCCTGGATTTCGATTCCATCCAACAGATGAAGAACTCGTGTTGCACTATCTCTGCCGTAAATGCACTTCACAACCGATTGCTGTTCCGATCATTGCCGAGATCGACCTTTATAAATATGATCCCTGGGACCTTCCTGGTATGGCATCCTATGGTGAGAAGGAGTGGTATTTTTTTTCACCTAGAGATAGAAAATATCCGAATGGGTCTAGACCGAATCGGGCTGCAGGAACTGGTTACTGGAAGGCAACCGGAGCCGATAAGCCTATTGGACAACCCAAACCAGTTGGGATTAAGAAAGCTCTGGTCTTTTACTCTGGAAAGGCTCCCAAAGGAGATAAGACCAATTGGATTATGCACGAATATCGTCTTGCAGACGTAGATCGTTCTGTTCGCAAAAAGAATAGCCTCAGGCTGGATGACTGGGTGCTGTGTCGCATCTACAATAAGAAAGGATCAATCGAGAAGCAACAACCGAGCAGCGGCGTCAGTACCGTCGTGAACCAGAAGGCCGAATCTTCGGAAGTCGAAGACAAGAAGCCCGATATAGTTCCACGTGGCGGCGGCGGGGGCGTACTTCCACCGCATCCTCCTACGGCTCAGGCTTCGGCAGGCGGCGTGACGACAGATTATATGTACTTCGACAACTCCGATTCGGTTCCGAAGCTTCACACGGACTCGAGTTGCTCGGAGCAGGTGGTGTCGCCGGAGTTTGCGAGCGAGGTTCAGAGCGAGCCAAAGTGGAACGAGTGGGATAAAAACCTCGAAAGTGCGTATAATTACCTCGATGCCACACTCACCAACGGTTTTGGGTTCCCGTTTCAGGGTAACAATCAGATGTCGCCGCTCCAGGATATGTTCATGAACCTTCCGAAACCGTTCTGA 906 0.5044 MASELQLPPGFRFHPTDEELVLHYLCRKCTSQPIAVPIIAEIDLYKYDPWDLPGMASYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGQPKPVGIKKALVFYSGKAPKGDKTNWIMHEYRLADVDRSVRKKNSLRLDDWVLCRIYNKKGSIEKQQPSSGVSTVVNQKAESSEVEDKKPDIVPRGGGGGVLPPHPPTAQASAGGVTTDYMYFDNSDSVPKLHTDSSCSEQVVSPEFASEVQSEPKWNEWDKNLESAYNYLDATLTNGFGFPFQGNNQMSPLQDMFMNLPKPF 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03081 301 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
Aip07g03081 301 PANTHER NAC DOMAIN-CONTAINING PROTEIN 2-LIKE 2 279 - -
Aip07g03081 301 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Aip07g03081 301 MobiDBLite consensus disorder prediction 162 178 - -
Aip07g03081 301 MobiDBLite consensus disorder prediction 162 204 - -
Aip07g03081 301 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Aip07g03081 301 Gene3D NAC domain 16 161 IPR036093 GO:0003677|GO:0006355
Aip07g03081 301 PANTHER NAC TRANSCRIPTION FACTOR 56 2 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03081 Aip-Chr7 118126868 118129378 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03081 1 301 NAC Transcription Factor Family AT1G01720 68.387 2.16e-147 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aip07g03081 NAM 1.8e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03081 - - gmx:732553 507.679