Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03080 ATGGCGGAGACTATCTCTCCCATGGAAATCGACGGCAACGAAACCCCTTTCCCTTCAAGTACCGACAAGGGTAAGAGGGTCTTCGTCGCCGGGAACAACTCCGGTAAAGGCAAGGCCACTCCGTGGGTCGAGAAGTACCGCCCTCAGTCCCTAGATGACGTCGCTGCTCACCGTGACATCATCAGTACCATTGATAGGCTGACTACTGAGAACAGATTGCCACATCTTCTACTATATGGTCCACCTGGCACGGGCAAAACTTCGACTATTCTTGCCGTGGCACGCAAACTCTATGGAAAGCAATACCACAAGATGATTTTGGAGCTCAATGCCTCTGATGAAAGAGGAATTGATGTTGTACGGCAGCAGATTCAAGATTTTGCTAGCACCCAGAGCTTAACATTTGGTGCAAAGGCCTTAGTGAAATTGGTCTTGCTAGATGAAGCAGATGCCATGACAAAGGATGCCCAATTTGCATTACGTAGAGTGATTGAGAAATATACAAAAAGTACAAGGTTTGCACTTATCTGCAATCATGTAAATAAGATTATCCCTGCACTACAATCAAGGTGCACTCGATTTCGATTTGCCCCTCTTGATGAAGTCCATGTCACTGATAGACTGAAGCATGTTATTAAAGCTGAAGGGCTTGATGTTGAAGACAGTGGCTTAGCTGCACTTGTTCGCCTTAGCAATGGTGATATGAGAAAGGCTTTGAATATTCTTCAGTCAACGCATATGGCTTCTCAGCAGATAACAGAAGAAGCTGTATACCTGTGCACTGGAAATCCATTGCCCAAAGATATTGAGCAAATATCTTATTGGCTGCTAAATGAACAATTTTCAGAGAGTTTTAGAAGAATACATGAAATCAAGACAAGGAAAGGATTGGCCCTGGTAGATATTGTGAGAGAAGTGACAATGTGA 927 0.4423 MAETISPMEIDGNETPFPSSTDKGKRVFVAGNNSGKGKATPWVEKYRPQSLDDVAAHRDIISTIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGKQYHKMILELNASDERGIDVVRQQIQDFASTQSLTFGAKALVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIPALQSRCTRFRFAPLDEVHVTDRLKHVIKAEGLDVEDSGLAALVRLSNGDMRKALNILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNEQFSESFRRIHEIKTRKGLALVDIVREVTM 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03080 308 PANTHER REPLICATION FACTOR C SUBUNIT 5 36 307 - -
Aip07g03080 308 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 40 257 IPR027417 -
Aip07g03080 308 Gene3D - 34 198 IPR027417 -
Aip07g03080 308 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 36 307 - -
Aip07g03080 308 CDD AAA 60 198 - -
Aip07g03080 308 CDD HLD_clamp_RFC 199 261 - -
Aip07g03080 308 MobiDBLite consensus disorder prediction 1 24 - -
Aip07g03080 308 Gene3D - 264 308 - -
Aip07g03080 308 SUPERFAMILY post-AAA+ oligomerization domain-like 264 306 IPR008921 GO:0003677|GO:0006260
Aip07g03080 308 Gene3D - 201 263 - -
Aip07g03080 308 SMART AAA_5 72 202 IPR003593 -
Aip07g03080 308 Pfam ATPase family associated with various cellular activities (AAA) 76 197 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03080 Aip-Chr7 118122364 118126611 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03080 1 308 Core DNA Replication Machinery Family AT1G77470 76.899 5.19e-172 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03080 K10756 - gmx:100782652 525.013