Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03059 ATGGCCATGGGGGATTCAAGGGTTGACACAATTGCACGCTTAGCTCAATGGAAAATCGATAACTTCGGACCTTGTTCCTACAAGAAATCTGACCCTTTCAAGGTCGGAATCTGGAATTGGTACTTATCCATAGAGAGAAACAGGTACCTCTACATACACCTGTTTCCAGAACCTTCTCGTGTCTCCAAGGAGCAGCCACCCGTTGCTCGTTTCATTCTTCGTGTTTCCAATGCTGGCTCTTCCCGCAGGTTCTATATTTCCCCTGTCCATGAAAGGATACTTAGGACATATGATGACTTTGTCTGGCCTGTTGATACTTCATTTGTTGGTCGCTTCATTATTGATGTTGAATTTCTTGACTTGAAGATATGCCCTCTGAATGGTGGGGAAGCTAGTTCTATATGGCCATCCGAGGGAAAATTGCAATCCATTGCATCTCAAAGTACTCTTAGTTGCCTCTCACGCATGCTTGATGATGCTATTCATGCTGACCTAACCATTATTACAGCTGATGGTACATTGAGAGCTCACAAGGCAATCTTGTCTGCAAGTTCGCCGGTGTTCCAGAGTATGTTTCATCACAACCTGAGGGAGAAAGAGTCATCTACTATCCATATAGAAGACATGTCGCTAGAATCTTGCACGGCTCTTCTAAGATACTTGTATGGAACAATCAAGCAAGACGATTTCTGGAAACACCGGCTTGCATTGCTTGGAGCAGCCAATAAATATGACATCACCGGTCTCAAAGACGTGTGCGAAGACAGTCTGCTGGAAGATCTTAACTCCGGAAATGTTCTCGAGAGGCTCAACGAAGCTTGGCTTTATCAATTACACAAGTTAAAGAAAGGATGCTTGACCTTCTTATTTGACTTCGGAAAGATATATGATGTTAGAGATGAAGTAAACAACTTTTTTCAGCATGCTGATAGGGAGCTAATGATGGAGATGTTTCAGGAAGTGCTCACAGTTTGGAGACCGGTATAA 987 0.4336 MAMGDSRVDTIARLAQWKIDNFGPCSYKKSDPFKVGIWNWYLSIERNRYLYIHLFPEPSRVSKEQPPVARFILRVSNAGSSRRFYISPVHERILRTYDDFVWPVDTSFVGRFIIDVEFLDLKICPLNGGEASSIWPSEGKLQSIASQSTLSCLSRMLDDAIHADLTIITADGTLRAHKAILSASSPVFQSMFHHNLREKESSTIHIEDMSLESCTALLRYLYGTIKQDDFWKHRLALLGAANKYDITGLKDVCEDSLLEDLNSGNVLERLNEAWLYQLHKLKKGCLTFLFDFGKIYDVRDEVNNFFQHADRELMMEMFQEVLTVWRPV 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03059 328 PANTHER OS08G0495500 PROTEIN-RELATED 4 328 IPR044714 -
Aip07g03059 328 ProSiteProfiles BTB domain profile. 163 222 IPR000210 GO:0005515
Aip07g03059 328 PANTHER BTB/POZ DOMAIN PLANT PROTEIN 4 328 - -
Aip07g03059 328 SMART BTB_4 163 261 IPR000210 GO:0005515
Aip07g03059 328 CDD MATH 17 103 IPR002083 GO:0005515
Aip07g03059 328 Pfam BTB/POZ domain 157 259 IPR000210 GO:0005515
Aip07g03059 328 CDD BTB_POZ_ZBTB_KLHL-like 162 244 - -
Aip07g03059 328 SUPERFAMILY POZ domain 146 259 IPR011333 -
Aip07g03059 328 Gene3D Potassium Channel Kv1.1; Chain A 137 290 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03059 Aip-Chr7 117668510 117670898 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Aip07g03059 BTB 2.4e-22 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03059 K10523 - rcu:8278000 573.933