Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03052 ATGGCAAGCGTTCTTAGACAGCAGCAACAGCCAGCAGGGAGTGGTGGTAACAACCGCGTGGTTGCCGTGAGTGCCACACCTCCCAATAATATCCTCCATATTCATGCTGATGCCCCCTCAAATCACGAGAAAAAAGGGTGGAAGAAGTTTCTGTCATTTATAGGGCCTGGTTTTCTCGTCTCTCTCGCTTACCTTGATCCTGGAAACTTGGAAACTGATCTCCAAGCTGGAGCTAATCACCGATACGAGCTGCTGTGGGTGATACTTATCGGATTGATATTTGCTCTTATTATTCAGTCATTAGCTGCAAATCTTGGCGTAAGCACAGGGAAACACCTTTCAGAGATATGCAAAGCGGAGTATCCAAGACTCGTTAGGTACTGCTTATGGTTATTAGCTGAGCTTGCTGTCATAGCCGCAGACATTCCAGAAGTGATTGGAACGGCGTTTGCACTGAACATACTATTCCACATCCCAGTATGGGGAGGAGTTCTAGTGACTGGGTGCAGCACTCTGTTGCTTCTTGGTCTCCAGAGATTTGGGGTAAGGAAGTTGGAGTTGCTGATATCAACGCTGGTATTTGTGATGGCAGCATGTTTCTTTGGAGAAATGAGTTACGTGAAACCACCAGCGTCTGGTGTCATAAAAGGCATGTTTATTCCCAAACTCAGTGGTCAAGGTGCCACTGCCGACGCCATTGCCCTTTTAGGTGCCCTTGTCATGCCGCACAACCTCTTCCTCCACTCTGCTCTGGTGCTGTCTAGGAAAGTACCTAATACAGTTCGTGGCATCAATGACGCGTGTAAATATTTTCTGATAGAGAGTGGGTTCGCACTGTTTGTGGCATTTCTGATCAACGTTGCAGTTATTTCTGTGTCTGGCACTGTTTGCTCAGCTTCAAATCTTTCTTCGGAAAACACTGATCATTGCAGCGATCTCACCCTTAACTCTGCTTCCTTTCTTCTCAAGAATGTGTTGGGAAGGTCTAGCTCAACGATTTATGCAATAGCACTATTAGCCTCAGGACAAAGTTCCGCTATTACTGGAACCTATGCAGGACAGTACATTATGCAGGGTTTCTTAGACTTGAAGATGAAAAGATGGCTTAGGAACTTGATGACTAGGACCATTGCCATAGCACCAAGCCTTGTTATGATACTTTCTTTTGAGCTTCCGTTTGCTTTAATTCCACTCCTTAAGTTTAGTAGCAGCAGTACCAAGATGGGACCTCACAAGAACTCTATGATAATAATTGTCATCTCATGGATCCTAGGATTGGGAATCATAGGCATCAATGTGTACTACCTCATCACTGCCTTCGTGGGTTGGCTAATTCATAATAGTTTGCCAAAGGTGGGAAATGTGTTCATTGGGATCATAGTGTTTCCTCTCATGGCAATCTATGTCGGCTCAGTTATATACCTAACATTCAGAAAAGACAATGTTCAGACATATATTGAGACCAAGGATAACACAGCAATGCAAACCCATGTGGAAAAGGGGTTCATGAATTCTAATGGTGAGTTAGAGTTGAACCATGGCCCTATCAGAGAAGATTTAGCTGATATCCCACTACCGGAATAA 1584 0.4451 MASVLRQQQQPAGSGGNNRVVAVSATPPNNILHIHADAPSNHEKKGWKKFLSFIGPGFLVSLAYLDPGNLETDLQAGANHRYELLWVILIGLIFALIIQSLAANLGVSTGKHLSEICKAEYPRLVRYCLWLLAELAVIAADIPEVIGTAFALNILFHIPVWGGVLVTGCSTLLLLGLQRFGVRKLELLISTLVFVMAACFFGEMSYVKPPASGVIKGMFIPKLSGQGATADAIALLGALVMPHNLFLHSALVLSRKVPNTVRGINDACKYFLIESGFALFVAFLINVAVISVSGTVCSASNLSSENTDHCSDLTLNSASFLLKNVLGRSSSTIYAIALLASGQSSAITGTYAGQYIMQGFLDLKMKRWLRNLMTRTIAIAPSLVMILSFELPFALIPLLKFSSSSTKMGPHKNSMIIIVISWILGLGIIGINVYYLITAFVGWLIHNSLPKVGNVFIGIIVFPLMAIYVGSVIYLTFRKDNVQTYIETKDNTAMQTHVEKGFMNSNGELELNHGPIREDLADIPLPE 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03052 527 PRINTS Natural resistance-associated macrophage protein signature 157 176 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip07g03052 527 PRINTS Natural resistance-associated macrophage protein signature 342 361 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip07g03052 527 PRINTS Natural resistance-associated macrophage protein signature 232 255 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip07g03052 527 PRINTS Natural resistance-associated macrophage protein signature 129 155 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip07g03052 527 PRINTS Natural resistance-associated macrophage protein signature 182 203 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip07g03052 527 PRINTS Natural resistance-associated macrophage protein signature 370 387 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip07g03052 527 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 48 387 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip07g03052 527 PANTHER METAL TRANSPORTER NRAMP5 40 527 - -
Aip07g03052 527 MobiDBLite consensus disorder prediction 1 20 - -
Aip07g03052 527 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 40 527 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip07g03052 527 Hamap Divalent metal cation transporter MntH [mntH]. 36 440 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip07g03052 527 Pfam Natural resistance-associated macrophage protein 71 389 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03052 Aip-Chr7 117606737 117612039 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03052 14 526 Inorganic Solute Cotransporters AT1G15960 56.075 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03052 K21398 - gmx:100787785 859.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03052 07 117606737 117612039 Aip07g03052 07 117606737 117612039 ECH