Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03012 ATGGGAGCGGATTCTTACGGCATTGTTTATCTTGCCAATGTTGTTGATGAACAAACACCGTATCGGAGCTTCATTGTTGTGAAGAGCTCCATTCCCAAATTGGCATTCTCACTGAAGAAAGAAGAACAGATTTTTAAATCAGTTTGGGAAGAGACTGAGGTGAGTGTCTATGCACGCATGATTGTTAAAGGGCTTTCGCATATTCATCGCAAAGGAATCGTCCACTGTGACCTCAAGCCGGAGAACATTCTTGTGTTTCCTTCATTGGATAAAGAGATTGCAAACTATCAATTGAAGATCGCGGATTTTGGATTATCGAAGACCAAAGAGGAGGAAGCAGATGTTGAGTTGTGGAAGTCCAAGCCTAGAGGTACGCTGTCATACTTGTCGCTAGAAGCGTTTTTCGGTCATATTGATGCTCCGATGGATATATGGGCACCTGGTTGCATAGTAATTAAAATACTCACTGGATTTCTTGCCTGGGGTGAGAGTGTTTTGCATGAGGATTATTTGACGTACTTGGTTGAGCATTTTGGAGAATCACCCAAGAAGCCGCAAGGAATCGGTTTTTTCTGTTCTAATTTTCTGGAAAAATGCTTTATGAAGAATCCTAGCAAGAGGTGGACTACTGACATGCTTCTTGGGCCTGATGGCTATGCTGTAGGTTTCTTGGGTCAGGCCGTCTTCTTCTCCATGATGGCTTTGCCGAAAAGGAGTTGGAGTCGGGCGGTATTAGGAAATAGAAAAGTTGTACAAAGTGTTTATGAATAA 771 0.4267 MGADSYGIVYLANVVDEQTPYRSFIVVKSSIPKLAFSLKKEEQIFKSVWEETEVSVYARMIVKGLSHIHRKGIVHCDLKPENILVFPSLDKEIANYQLKIADFGLSKTKEEEADVELWKSKPRGTLSYLSLEAFFGHIDAPMDIWAPGCIVIKILTGFLAWGESVLHEDYLTYLVEHFGESPKKPQGIGFFCSNFLEKCFMKNPSKRWTTDMLLGPDGYAVGFLGQAVFFSMMALPKRSWSRAVLGNRKVVQSVYE 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03012 256 Pfam Protein kinase domain 45 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g03012 256 ProSitePatterns Serine/Threonine protein kinases active-site signature. 73 85 IPR008271 GO:0004672|GO:0006468
Aip07g03012 256 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 50 214 - -
Aip07g03012 256 SUPERFAMILY Protein kinase-like (PK-like) 2 215 IPR011009 -
Aip07g03012 256 SMART serkin_6 5 220 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g03012 256 Gene3D Transferase(Phosphotransferase) domain 1 37 216 - -
Aip07g03012 256 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 50 214 - -
Aip07g03012 256 ProSiteProfiles Protein kinase domain profile. 1 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03012 Aip-Chr7 117041344 117042429 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03012 51 214 MAP Kinase Kinase Kinase AT4G36950 40.476 1.61e-30 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aip07g03012 Pkinase 7e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03012 - - aip:107647747 327.405