Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03011 ATGAGTGATTTACAATGGAAGAAGCTTAAGGTCTTGGGAGCCGGTTCTTATGGCACTGTTTATCTTGCCATTGTTGTTGATGAACAAACACTGAAACCTCTCCCGGAGACCGAGGTGAGTGTCTATGCACGCATGAGTGTTAAAGGACTTTCGCATATTCATCGCAAAGGACTCGTCCACTGTGACCTCAAGCCGGAAAACATTCTTGTGTTTCCCTCATTGGATAAAGAGATTGCAAACTATCAATTGAATATCACGGATTTTGGATTATCGAAGACCAAAGAGGAGGAAGCAGATGTTGAGTTATGGAAGTCCAAGCCTAGAGGTACGCTGTCATACTTGTTGCCGGAAGAATTTTCCGGTCATATTGATGCTCCGATGGATATATGGGCACTTGGTTGCATAGTGATTGAAATGCTCACTGGATTGCCTGCCTGGGGGCCTGATGGCTATGCCGTAGGGTTTCTTGGGTCAGGCCGTCTTCTTCTCCTTGATGGCTTTGCCGAAAAGGAGTTGGAGTCGGGCGGTATTAGGAAATAA 540 0.4593 MSDLQWKKLKVLGAGSYGTVYLAIVVDEQTLKPLPETEVSVYARMSVKGLSHIHRKGLVHCDLKPENILVFPSLDKEIANYQLNITDFGLSKTKEEEADVELWKSKPRGTLSYLLPEEFSGHIDAPMDIWALGCIVIEMLTGLPAWGPDGYAVGFLGSGRLLLLDGFAEKELESGGIRK 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03011 179 SMART serkin_6 6 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g03011 179 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 31 146 - -
Aip07g03011 179 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 31 146 - -
Aip07g03011 179 Gene3D Transferase(Phosphotransferase) domain 1 21 159 - -
Aip07g03011 179 ProSiteProfiles Protein kinase domain profile. 1 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g03011 179 Pfam Protein kinase domain 32 146 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g03011 179 ProSitePatterns Serine/Threonine protein kinases active-site signature. 58 70 IPR008271 GO:0004672|GO:0006468
Aip07g03011 179 SUPERFAMILY Protein kinase-like (PK-like) 6 150 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03011 Aip-Chr7 117039612 117040702 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03011 32 146 MAP Kinase Kinase Kinase AT4G36950 46.552 8.36e-26 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aip07g03011 Pkinase 7e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03011 - - aip:107607793 256.529