Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03008 ATGAGTGATTTACAATGGAAGAAGCTTAAGGTCTTGGGAGCCGGTTCTTATGGCACTGTTTATCTTGCCATTGTTGTTGATGAACAAACACCGTATCAGAGCTTCATTGTTGTGAAGAGCTCTATTCCCAAATTGGCATTTTCACTAAAGAAAGAAGAACAGATTTTTAAATCAGTTTGGAAAGATGACTTGATCCACAAGAAACCTCTCCCGGAGACCGAGGTGAGTGTCTATGCACGCATGAGTGTTAAAGGGCTTTCGCATATTCATCACAAAGGACTCGTCCACTGTGACCTCAAGCCGGAGAACATTCTTGTGTTTCCTTCATTGGATAAAGAGATTGCAAACTATCAATTGAAGATCACGGATTTTGAATTATCGAAGACCAAAGAGGAGGAAGCAGATGTTGAGTTGTGA 417 0.4101 MSDLQWKKLKVLGAGSYGTVYLAIVVDEQTPYQSFIVVKSSIPKLAFSLKKEEQIFKSVWKDDLIHKKPLPETEVSVYARMSVKGLSHIHHKGLVHCDLKPENILVFPSLDKEIANYQLKITDFELSKTKEEEADVEL 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03008 138 ProSitePatterns Serine/Threonine protein kinases active-site signature. 94 106 IPR008271 GO:0004672|GO:0006468
Aip07g03008 138 Pfam Protein kinase domain 64 132 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g03008 138 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 63 134 - -
Aip07g03008 138 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 5 58 - -
Aip07g03008 138 SMART serkin_6 6 138 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g03008 138 SUPERFAMILY Protein kinase-like (PK-like) 6 132 IPR011009 -
Aip07g03008 138 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 5 58 - -
Aip07g03008 138 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 63 134 - -
Aip07g03008 138 Gene3D Transferase(Phosphotransferase) domain 1 62 137 - -
Aip07g03008 138 ProSitePatterns Protein kinases ATP-binding region signature. 12 39 IPR017441 GO:0005524
Aip07g03008 138 ProSiteProfiles Protein kinase domain profile. 1 138 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03008 Aip-Chr7 117034944 117035473 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03008 4 138 MAP Kinase Kinase Kinase AT4G36950 29.240 3.95e-16 71.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aip07g03008 Pkinase 3.2e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03008 - - aip:107647747 219.935