Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03006 ATGGAAGTTTTTTCAGGTCACAGAAATGGTTTGCTTGGTTCAATTCACTGGAAAATCAGTAAGAGTACAAAAGTGCTAAGTGATGAGAGTGCAGAGAGTGATGCTGGTAAGAGTACTGGCCAATTTTCGGATCACAGTTTGGCGAAGATTTTAATGGATACTACTGAGTTTGATAGAAAAGATAGCTGCTCGGTTTGTGATCCAACCCTGGCATTGCCGCCTCCAGATTCTTGCCACCAATCTGCAGAAGAAGAATCTTGCAGTGATCGTGGTTGTGATAATTCCTTGGCTATAGTGCCTGTTCCGGCCATGGATGTCGCACCACCTGAATTGAAACCAGGCTGGCCACTACTTCACCAGAGAATCTTATCAGAAACTCAGTTTCCTGATAGACTATCGGCACGCCAGATCTCTGTGGTCCAGTGGGCAATGAGGTTGCCTAGTAGGAATCTTTCATATGCTTCGGATCAAGATCGCAAGCCTCAAGACGAATCTGTGCCTTTGGATAGTGAAACTGGTGCTGTTGTTCCAGTAGATTATGGAATAGTGCCTGCTTCTTTGCCTGAACCGAACTCGAAAAGTATTCCTCTTGAATTGGCCAGCCTTCATGAGAAATACTCGTCAAGATGCAGATTGTTTGAGTACCAAGAACTTGTATCAGCAACATCAAATTTCTTGCCTGAGAACTTGATTGGGAAAGGAGGAAGTAGTGAGGTTTATAGAGGGTGCCTTCCTGATGGACAGGAGCTTGCTGTGAAGATCCTAAAGCCTTCTGATGAAGTTTTAAAGGAGTTTCTTCTTGAAATAGAAATTATCACTACCTTGAATCATAAAAACATTATATCTCTTCTTGGATTCTGCTTTGAGAATGGGAATCTTCTTCTTGTCTATGATTTATTATCAAGAGGAAGCCTTGAAGAAAACCTTCATGGAAGTAAGAAAAATTCTCTTGTGTTTGGTTGGAATGAGAGATATAAGGTTGCAATGGGTGTTGCCGAGGCTTTGGATTATCTGCACTGCAAAGATGATCAGCCCGTGATCCATCGCGATGTAAAATCATCAAATGTATTATTATCTGAGGATTTTGAACCCAAGCTCTCTGATTTTGGACTTGCTAAATGGGCATCAACTTCATCATCACAGATAACTTGCACAGATGTTGCTGGAACCTTTGGCTACCTGGCTCCTGAATACTTCATGTATGGCAAAGTACATGATAAGATCGACGTCTATGCTTTCGGTGTCGTGCTCCTTGAGCTTCTTTCAGGGAGGAAGCCCATAAGTGGTGATTTTCCAAAAGGTCAAGAGAGTCTTATCATGTGGGCAAGTCCACTTCTAGATAGTGGAAAAGTGTTGCAACTGTTAGATCCCACTTTGGGCGATAACTATGATCATGAGGAGATGGAAAGAATGGTCTTAGCAGCCACACTTTGTTTAAGGCGTGCTCCGAGAGCTAGGCCTAAAATGAGCCTTATTTCTAAGCTCCTTCATGGTGATGCTGATGTAATCAAGTGGGCAAGGTCGGAAATTAATGCGAGGAAAGCACCAGAAATGCTTGAAGATGAAGCGTGTCCACCGAGCAACCTGCAGTCACATCTTAACCTTGCACTCCTTGATGTGGAAGATGACTTGCTCTCCATGTGTAGTGTCGAGCAGCACGTCTCTTTGGAGGACTACTTGAGAGGCCGGTGGAGCCGCTCCTCGAGCTTTGACTGA 1716 0.4371 MEVFSGHRNGLLGSIHWKISKSTKVLSDESAESDAGKSTGQFSDHSLAKILMDTTEFDRKDSCSVCDPTLALPPPDSCHQSAEEESCSDRGCDNSLAIVPVPAMDVAPPELKPGWPLLHQRILSETQFPDRLSARQISVVQWAMRLPSRNLSYASDQDRKPQDESVPLDSETGAVVPVDYGIVPASLPEPNSKSIPLELASLHEKYSSRCRLFEYQELVSATSNFLPENLIGKGGSSEVYRGCLPDGQELAVKILKPSDEVLKEFLLEIEIITTLNHKNIISLLGFCFENGNLLLVYDLLSRGSLEENLHGSKKNSLVFGWNERYKVAMGVAEALDYLHCKDDQPVIHRDVKSSNVLLSEDFEPKLSDFGLAKWASTSSSQITCTDVAGTFGYLAPEYFMYGKVHDKIDVYAFGVVLLELLSGRKPISGDFPKGQESLIMWASPLLDSGKVLQLLDPTLGDNYDHEEMERMVLAATLCLRRAPRARPKMSLISKLLHGDADVIKWARSEINARKAPEMLEDEACPPSNLQSHLNLALLDVEDDLLSMCSVEQHVSLEDYLRGRWSRSSSFD 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03006 571 SUPERFAMILY Protein kinase-like (PK-like) 206 494 IPR011009 -
Aip07g03006 571 ProSitePatterns Serine/Threonine protein kinases active-site signature. 346 358 IPR008271 GO:0004672|GO:0006468
Aip07g03006 571 Pfam Protein kinase domain 229 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g03006 571 Gene3D Phosphorylase Kinase; domain 1 192 299 - -
Aip07g03006 571 Gene3D Transferase(Phosphotransferase) domain 1 300 517 - -
Aip07g03006 571 ProSiteProfiles Protein kinase domain profile. 225 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g03006 571 ProSitePatterns Protein kinases ATP-binding region signature. 231 253 IPR017441 GO:0005524
Aip07g03006 571 SMART serkin_6 225 496 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g03006 571 PANTHER OS08G0249100 PROTEIN 8 554 - -
Aip07g03006 571 PANTHER - 8 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03006 Aip-Chr7 117017914 117022720 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03006 212 495 Trihelix Transcription Factor Family AT1G68690 45.329 4.24e-75 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Aip07g03006 Pkinase 1.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03006 - - aprc:113846853 826.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03006 07 117017914 117022720 Aip07g03006 07 117017914 117022720 ECH