Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02982 ATGGAGCCTCAGACTCAGGAAGCATCAAATAGTCAAAGACACACAAGTGATCAAAATGTGCATAATGTTAGTGATCATGTGGATGAAGACGTAACTTCTGATGCAGTGGATATGGATCAATATCGCATAAACTCTTGGGAAGATATTGGTAAGATTGATTTTTCAAGTCTATCTATGAAAAATATTTGTCAATTGCACTTTGCTGATCTTGGCTTGGCATTCGAATTTTATAATTCATATGCCAAGACGAGGGGCTTCAGTGTGCGAAAGAGTAGGAGTAGAATAGTTGATGGAAAAGTTAGAGAAAAATGGAACCATATGAAAAATCGAGTTAGGGAGCCAAAACCAGAGACAAGATGTGGTTGTATGAGTAAACTTCATGTTTTCTTCGATGCGGTAACTGAGAGTTGGGTAGTGAGAGATTTTTATGATGAATACAACCATGATCTTGTTGTTCCAAAGTTAGCAAGAATGTTAAGATCTCACAAGAAAATGACTGAGCCTGACATTAGTCAAATGAACCATATGAAAGAGGTGGGGATCAGCATACCAAACATATTTGGGTCATTAGCTAGCCAGTGTGGTGGGTACGAGAACGTTAATTTTTCAATTAAGGATATGCACAATCAAGTTGCAAAGCAAAGAAGACAATTACCTGATGATTTAACCTTTGCAATGGCTTACCTGGAAACGCTAGCAGCAAGGGATCGAAACTTGTTCTATAGTGTTGAAAAGGGTAGAAAAGAAGTGTTTTGGCAAATTTTTTGGTGTGATGGCCGGTGTCAGTTGGATTACGATCTGTTCGGGGATGTGCTAGCATTTGACGCCACATATAAGAAGAATAGATACAGATTGCCGGTGGTAATATTCTCGGGAGTTAACCACCATAATCAAACCGTTGTATTTGGTGCTGCGATAGTTTCGAATGAGAGGAAAAGCACCTATGTGTGGTTACTAAAACAACTTCTCATTGCAATGAAGGGAAAGATACCGACTTCAGTAATTACGGATGGTCATCAATCGATGGCTATtgctattcaggaagtgtttccgaatgcacatcataggttatgtgcatggcacttgatgcgtaatGCAACAAGTAATATTCACAAACCTCAGTTTACGAAAATGTTTACAAAGTTAATGCTAGGTGATTACGAAGTTGGTGTGTTCGAACAAAAGTGGGAGGAAATGGTTGGATTCTTTGGAGTGGAAGATCGGGAATGGATAGCAGATATGTATGGGAAAAGAAACATGTGGGCTACCGCTCATATCCGAGGAAAATTCTTTGCTGGGTTTAGAACGACTTCGAGGTGTGAAAGTCTACATGCTGTCCTCAAAAGATATGTTAAATCACGCCATAATTTGACAGAATTTGTTGACCACTTCCAGCGTTGTTTGAGCTACATGCGGCACAGAGAGGATTTGGCAGACTTTAAATCATCAACTGGACAACCTATGATGCAGACACACTTTCAACAATTAGAAAGGTCAGCATCTACCATTTATACCCGGCAAATTTTTATGTTGTTCCGTTCAATGCTCCACAAGGCCAGCACATTGAAGGTAATATATGAAAAGGAAACGAGTTCTTGCAAGATTTATCAGGTGTCAAAATTTTACAAGCCTAACATGATATGGCATGTGTCTTTTCACGAAGAGCAAGTTGAATTTAAATGCTCATGCATGAGAATGGACTCCATAGGTATTCCATGCAGTCATATACTTGCTGTTTTGGGTTTTCTAGACATTGCAGAGCTGCCAAAATCATTAGTGCTGCGAAGATGGACTAGAAAAGCGAAGGAAGGAATTAGTGGGTATGATGACATGGGAGGCTTGATGGAGGATTCCTTGGCTATCAGTCGGCGTGCATGTTTGGCACATTGGGCTCATAGTGGGGACAATAACATGATGGAGGGGCATGCGGAATACATGTACGAAGACCTTGCAAAGAATGGAAGTACTGAGATAGAGACCACAAGGAAGCCTAAGCGTTGCAGCTACTGTCGCAAGAGGGGTCATAACATTGCTACGTGTTCCATGAGGAAAATAGATGAAAGCACTCCCCAATTTGATGATGACGCTGTGGAGAATATTGAGGGTGAAGACTACTCCTTCGTAGATGCTGAAAGTGATGAGTATGTTCACACTGAATGGTTTGAGGAGGAAGATGAAGATTTAGATTCCTCAAGGTATTATGAACAGAGTGGTGGCGAGACTGAGTTCTCAATGGATTACGATTCTGGTGGGGCAAATGATGATGATGAGGCATAG 2277 0.3957 MEPQTQEASNSQRHTSDQNVHNVSDHVDEDVTSDAVDMDQYRINSWEDIGKIDFSSLSMKNICQLHFADLGLAFEFYNSYAKTRGFSVRKSRSRIVDGKVREKWNHMKNRVREPKPETRCGCMSKLHVFFDAVTESWVVRDFYDEYNHDLVVPKLARMLRSHKKMTEPDISQMNHMKEVGISIPNIFGSLASQCGGYENVNFSIKDMHNQVAKQRRQLPDDLTFAMAYLETLAARDRNLFYSVEKGRKEVFWQIFWCDGRCQLDYDLFGDVLAFDATYKKNRYRLPVVIFSGVNHHNQTVVFGAAIVSNERKSTYVWLLKQLLIAMKGKIPTSVITDGHQSMAIAIQEVFPNAHHRLCAWHLMRNATSNIHKPQFTKMFTKLMLGDYEVGVFEQKWEEMVGFFGVEDREWIADMYGKRNMWATAHIRGKFFAGFRTTSRCESLHAVLKRYVKSRHNLTEFVDHFQRCLSYMRHREDLADFKSSTGQPMMQTHFQQLERSASTIYTRQIFMLFRSMLHKASTLKVIYEKETSSCKIYQVSKFYKPNMIWHVSFHEEQVEFKCSCMRMDSIGIPCSHILAVLGFLDIAELPKSLVLRRWTRKAKEGISGYDDMGGLMEDSLAISRRACLAHWAHSGDNNMMEGHAEYMYEDLAKNGSTEIETTRKPKRCSYCRKRGHNIATCSMRKIDESTPQFDDDAVENIEGEDYSFVDAESDEYVHTEWFEEEDEDLDSSRYYEQSGGETEFSMDYDSGGANDDDEA 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02982 758 ProSiteProfiles Zinc finger SWIM-type profile. 546 584 IPR007527 GO:0008270
Aip07g02982 758 Pfam SWIM zinc finger 560 580 IPR007527 GO:0008270
Aip07g02982 758 MobiDBLite consensus disorder prediction 1 31 - -
Aip07g02982 758 MobiDBLite consensus disorder prediction 721 758 - -
Aip07g02982 758 PANTHER OS02G0262500 PROTEIN 67 604 - -
Aip07g02982 758 Pfam FAR1 DNA-binding domain 75 151 IPR004330 -
Aip07g02982 758 SMART 26again6 559 586 IPR006564 GO:0008270
Aip07g02982 758 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 67 604 IPR031052 GO:0006355
Aip07g02982 758 MobiDBLite consensus disorder prediction 1 18 - -
Aip07g02982 758 Pfam MULE transposase domain 271 365 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02982 Aip-Chr7 116578956 116583400 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip07g02982 MULE 7.7e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02982 - - ahf:112719698 1482.23