Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02980 ATGGAAGAGCTAAAGAAGGCCACTAACAACTTTGATGAAGGCCGAGAGACACAAGTTCCATTGCTTGTTTATGAATTCATTCAAGGTGGTACTCTTGATGAACATCTTCATGGTCAGAACCAATCTTTAAAGCTTAACAGGAAAACAAGATTGAGAATAGCAGCAGAAACTGCTGGGGCTTTGGCATACTTGCATTCTGCTACTTGTCCACCAATCATACATAGAGATGTTAAAACTACCAACATACTTCTTGATCATAATCTCAAAGCAAAGGTTTCTGATTTCGAAGCTTCAAAGATTGTTCCTCTTGATAAAACCGAACTATCCACCTTGGTGCAAGGGACTGTGGGATATCTAGACCCTGAATACTTCCACACAAGCCACAGAGTGATGTGTATAGTTTCGGAGTTGTTCTAG 417 0.4029 MEELKKATNNFDEGRETQVPLLVYEFIQGGTLDEHLHGQNQSLKLNRKTRLRIAAETAGALAYLHSATCPPIIHRDVKTTNILLDHNLKAKVSDFEASKIVPLDKTELSTLVQGTVGYLDPEYFHTSHRVMCIVSELF 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02980 138 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 16 128 IPR045274 GO:0007166
Aip07g02980 138 Pfam Protein kinase domain 17 124 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g02980 138 Gene3D Transferase(Phosphotransferase) domain 1 9 132 - -
Aip07g02980 138 ProSitePatterns Serine/Threonine protein kinases active-site signature. 72 84 IPR008271 GO:0004672|GO:0006468
Aip07g02980 138 SUPERFAMILY Protein kinase-like (PK-like) 16 127 IPR011009 -
Aip07g02980 138 ProSiteProfiles Protein kinase domain profile. 1 138 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g02980 138 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 9 16 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02980 Aip-Chr7 116556748 116557252 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02980 16 127 Receptor kinase-like Gene Family AT1G21240 65.179 1.18e-45 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Aip07g02980 Pkinase 2.5e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02980 - - adu:107460563 221.861