Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02966 ATGGCTGAGCATTTATCAAAGAACCTCCTCTTCCTCATTTTCTTTTTAGCAGCTCATGCTAATGATGCAGCAACTCAACCCGCCAAACACTGCCTAACCAAATGCGGCCACGTCAGCATTCCCTTCCCGTTTGGCACCACAAAGGATTGCTCCCTTGACACCAATTTTCTCATAAATTGCACCAACAATGTCCCATACTTATTGCCCTTATCAAACAACACCGCCCTAATTCTCCTAAACATATCCCTCGTCGATTCCGATCTCCGCGTTTCGTCGCCGGTAGCTAGCGATTGCTATAGCATCGACGACCAGGGCAAAATCAGCAACATTCAAACCGATCAGTTTCTTTTCTCGGGAAACTTTAGCATCTCATGGACCCGAAACACGTTCACCGCAATTGGTTGTAACACACTTGGAGTAGTTGTGGCGTTTACACTGGAAGATTCGAGACATTATCCCGCCACATGCTTTTCCTACTGCGAGAAACTTGAACATGCGAGCAATGGCTCCTGCACCGGCAGCGGTTGTTGCCGTATTAATATTCCCCGCGCCGCAGAAGGGCGGTTATTAACGTTGATCGGTTATTATTTTGAGAACAATGACTTTAACAACAGCCAAGTGAGTGACTTCAACCCATGCAGTTATGCATTCTTGGTGGAAGAAGATGGCTATGAATTTGAGACGACACACCTGAAGAAGCTGGAGAGTACTGAGTTTCCGGTGGTTCTGGATTGGAGTATAGGGGACCAAACGTGTATTGAAGCTATGAAGAATCCTTCCAGCTTTGCGTGTAAGGCAGAGAACAGCACGTGTCACGATTCTGATAAGCGTCCTGGTTATGTTTGCAAATGCCCCTCTGGTTTTCAGGGTAACCCTTATCTCCTTCATGGTTGTCAACAAGATATTGATGAATGCGCTGGACCCAATGATTGCTTCCATAAAGCAAAATGCGAGAACACACCTGGCAGCTACAACTGTTTGTGTCCAGAAGGATTTGAAGGAGACGGGAAAAACAATGGAACTCGATGTACTAGTCCCAAGTCCAGTTATAGGACAAAGACCACTTTGATTTATTCATTATGTTTGGGCATCAGCATAGGCATCTTAGCGTTAGTTGTGGCAAGCTTTTATGTGCATTGGAAAGTGAACAAAAGAAAGCTCATCAAACTTAAAGAACAGTATTTTCAACAAAATGGCGGTTTCTTGTTGCAAGAACATATATCCAAACATAGAAACTCAGGCCAAATAGCCAAAGTCTTCACTATTGAGGAACTAAGAAAAGCAACCAACAACTTTGATGCATGCAAAATCCTAGGCCAAGGGGGCCAAGGAACAGTTTACAAAGGAGTATTATCAGACAATAAAACCGTAGCAATAAAGAAGTCCAAAATTAGTGGCCCAAGCCAAATTAATAAGGACTTCATCAATGAGTTAGTTGTACTGTCACAAATCAACCATAGGAATGTTGTTAAGCTCTTGGGTTGTTGTTTAGAAACAGAAATTCCCTTGCTTGTTTACGAATTCATTCCCAATGGTACTGTTTTTGAGCATCTTCATGGTCATGGAACATTTCTAAGACTTACATGGAAAACAAGATTGAGAATAGCTGCTGAAACTGCTGGGGCTTTAGCTTACTTGCATTTGGATACTTGTATCCCCATAATTCATAGAGATGTGAAAACTAGCAATATTCTACTTGATCATGATCTCACTGCAAAGGTTTCTGATTTCGGAGCTTCAAGGATTGTTCCTCAAGATAAAATTGAGTTAGCTACTTTGGTGCAAGGAACATGTGGGTATCTTGATCCAGAAACCTTCCTCACAAGCCAATTAACGGATAAGAGTGATGTTTATAGTTTCGGAGTTGTTCTTGCGGAACTATTTACAGGAAGAAAAGCTCTCTCTTTTGACATGCCGGATGCTGAGAAAAACCTTGCAATGTTCTTTGTAACTTCAATGGAAGAGAATCGTTTGCTTGATATTGTAGACAAGAGCATAATAAATGAAGCAAAGGTTGAGCATGTATATGAATTTGCCAAGATTGCAAAACAATGTTTAAGCTCGAAAGGAGAAGCAAGGCCTACAATGAAAGCAGTGGCAATGGAACTTCAGGGGATTAGAGCTGAGGAAAAACATATATGGTGCCGGGAGAAGGAGGAATTTCCATCTGAAGAAACTGAAATCCTTCTCAAAGCATCACCTTCTATTAGCAATAATCTTGAAGAAGAATACTTTATGCTTTTGGACCGAATTCAGTATCATTTTTAG 2268 0.4167 MAEHLSKNLLFLIFFLAAHANDAATQPAKHCLTKCGHVSIPFPFGTTKDCSLDTNFLINCTNNVPYLLPLSNNTALILLNISLVDSDLRVSSPVASDCYSIDDQGKISNIQTDQFLFSGNFSISWTRNTFTAIGCNTLGVVVAFTLEDSRHYPATCFSYCEKLEHASNGSCTGSGCCRINIPRAAEGRLLTLIGYYFENNDFNNSQVSDFNPCSYAFLVEEDGYEFETTHLKKLESTEFPVVLDWSIGDQTCIEAMKNPSSFACKAENSTCHDSDKRPGYVCKCPSGFQGNPYLLHGCQQDIDECAGPNDCFHKAKCENTPGSYNCLCPEGFEGDGKNNGTRCTSPKSSYRTKTTLIYSLCLGISIGILALVVASFYVHWKVNKRKLIKLKEQYFQQNGGFLLQEHISKHRNSGQIAKVFTIEELRKATNNFDACKILGQGGQGTVYKGVLSDNKTVAIKKSKISGPSQINKDFINELVVLSQINHRNVVKLLGCCLETEIPLLVYEFIPNGTVFEHLHGHGTFLRLTWKTRLRIAAETAGALAYLHLDTCIPIIHRDVKTSNILLDHDLTAKVSDFGASRIVPQDKIELATLVQGTCGYLDPETFLTSQLTDKSDVYSFGVVLAELFTGRKALSFDMPDAEKNLAMFFVTSMEENRLLDIVDKSIINEAKVEHVYEFAKIAKQCLSSKGEARPTMKAVAMELQGIRAEEKHIWCREKEEFPSEETEILLKASPSISNNLEEEYFMLLDRIQYHF 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02966 755 Pfam Calcium-binding EGF domain 301 343 IPR001881 GO:0005509
Aip07g02966 755 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED 17 741 - -
Aip07g02966 755 Gene3D Laminin 305 345 - -
Aip07g02966 755 SMART serkin_6 432 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g02966 755 ProSitePatterns Calcium-binding EGF-like domain signature. 301 326 IPR018097 GO:0005509
Aip07g02966 755 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 17 741 IPR045274 GO:0007166
Aip07g02966 755 SMART egfca_6 252 299 IPR001881 GO:0005509
Aip07g02966 755 SMART egfca_6 301 344 IPR001881 GO:0005509
Aip07g02966 755 Gene3D Phosphorylase Kinase; domain 1 399 508 - -
Aip07g02966 755 SUPERFAMILY Growth factor receptor domain 249 350 IPR009030 -
Aip07g02966 755 CDD STKc_IRAK 438 706 - -
Aip07g02966 755 CDD EGF_CA 301 335 - -
Aip07g02966 755 ProSiteProfiles EGF-like domain profile. 301 344 IPR000742 -
Aip07g02966 755 Pfam Wall-associated receptor kinase galacturonan-binding 31 91 IPR025287 GO:0030247
Aip07g02966 755 Pfam Protein tyrosine and serine/threonine kinase 435 702 IPR001245 GO:0004672|GO:0006468
Aip07g02966 755 SUPERFAMILY Protein kinase-like (PK-like) 416 710 IPR011009 -
Aip07g02966 755 ProSiteProfiles Protein kinase domain profile. 432 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g02966 755 SMART egf_5 304 344 IPR000742 -
Aip07g02966 755 SMART egf_5 251 299 IPR000742 -
Aip07g02966 755 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 317 328 IPR000152 -
Aip07g02966 755 ProSitePatterns Serine/Threonine protein kinases active-site signature. 554 566 IPR008271 GO:0004672|GO:0006468
Aip07g02966 755 Pfam Wall-associated kinase 169 284 IPR013695 GO:0004674|GO:0016021
Aip07g02966 755 Gene3D Transferase(Phosphotransferase) domain 1 509 727 - -
Aip07g02966 755 Gene3D Laminin 250 304 - -
Aip07g02966 755 SUPERFAMILY EGF/Laminin 300 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02966 Aip-Chr7 116101971 116105062 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02966 9 729 Receptor kinase-like Gene Family AT1G21230 45.205 0.0 573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Aip07g02966 PK_Tyr_Ser-Thr 7.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02966 - - ahf:112765693 1191.41