Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02941 ATGTCTAACACTGCTGGTCAAATCATCAAGTGCCGAGCTGCGGTTGCATGGGAGGCAGGGAAGCCATTGGTGATTGAAGAAGTGGAGGTTGCGCCACCTAAGGCCGGTGAAGTCCGTTTGAAGATTCTCTACACCTCACTTTGCCACACCGATGTTTACTTCTGGGAAGCCAAGGGCCAGACTCCATTATTTCCTCGGATATTTGGTCATGAAGCTGGAGGGATTGTGGAGAGTGTAGGAGAGGGAGTGACTCATCTGAAACCAGGTGACCATGCCCTCCCTGTGTTCACCGGAGAGTGTGGCGAATGCCCTCACTGCAAGTCAGAGGAGAGCAACATGTGTGACCTTCTCAGGATCAACACTGACAGGGGTGTCATGATCCATGATCAAGAATCAAGATTCTCCATTAAGGGAAAACCAATTTACCACTTTGTTGGGACCTCCACATTCAGTGAATACACTGTGGTTCATGCTGGATGTGTTGCAAAGATCAACCCTGAAGCACCACTTGACAAAGTTTGTGTTCTCAGCTGTGGAATCTGCACAGGTCTTGGTGCCACTATCAATGTTGCAAAACCAAAACCTGGTTCTTCTGTTGCTGTTTTTGGACTCGGAGCTGTTGGTCTTGCTGCTGCTGAAGGGGCAAGGATTTCTGGTGCATCAAGAATCATTGGGGTTGATTTAGTTTCCAGCCGATTCGAATTAGCTAAGAAGTTTGGGGTTAATGAATTTGTGAACCCAAAAGATCATAACAAACCTGTACAAGAGGTAATTGCTGAAATGACCAATGGAGGCGTGGATCGTTCTGTTGAATGTACTGGCAGCATCCAAGCTATGATCTCAGCATTTGAATGTGTCCACGATGGTTGGGGTGTTGCTGTTCTTGTTGGTGTGCCAAGCAAAGACGATGCTTTCAAAACTCATCCTACGAACTTCTTGAATGAGAGGACTCTCAAGGGTACCTTCTATGGTAACTACAAACCCCGAACCGATCTTCCTAATGTTGTGGAGAAGTACATGAGAGGGGAGTTGGAACTTGAGAAATTCATCACTCACACTGTTCCGTTCTCAGAGATTAACAAGGCTTTTGATTTGATGCTGAAAGGAGAGTCCATCAGGTGCATCATTCGGATGGACGAATAA 1143 0.4654 MSNTAGQIIKCRAAVAWEAGKPLVIEEVEVAPPKAGEVRLKILYTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTHLKPGDHALPVFTGECGECPHCKSEESNMCDLLRINTDRGVMIHDQESRFSIKGKPIYHFVGTSTFSEYTVVHAGCVAKINPEAPLDKVCVLSCGICTGLGATINVAKPKPGSSVAVFGLGAVGLAAAEGARISGASRIIGVDLVSSRFELAKKFGVNEFVNPKDHNKPVQEVIAEMTNGGVDRSVECTGSIQAMISAFECVHDGWGVAVLVGVPSKDDAFKTHPTNFLNERTLKGTFYGNYKPRTDLPNVVEKYMRGELELEKFITHTVPFSEINKAFDLMLKGESIRCIIRMDE 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02941 380 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 169 343 IPR036291 -
Aip07g02941 380 Gene3D - 19 370 - -
Aip07g02941 380 CDD alcohol_DH_plants 9 377 - -
Aip07g02941 380 Pfam Alcohol dehydrogenase GroES-like domain 36 163 IPR013154 -
Aip07g02941 380 SUPERFAMILY GroES-like 4 186 IPR011032 -
Aip07g02941 380 SUPERFAMILY GroES-like 328 377 IPR011032 -
Aip07g02941 380 PANTHER ALCOHOL DEHYDROGENASE 4 378 - -
Aip07g02941 380 PANTHER ALCOHOL DEHYDROGENASE-RELATED 4 378 - -
Aip07g02941 380 Pfam Zinc-binding dehydrogenase 206 336 IPR013149 -
Aip07g02941 380 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 69 83 IPR002328 GO:0008270|GO:0016491
Aip07g02941 380 Gene3D - 183 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02941 Aip-Chr7 115668241 115672118 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02941 37 370 Monolignol Biosynthesis Gene Families AT1G72680 25.223 2.76e-14 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02941 K18857 - gmx:100783858 719.539
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02941 07 115668241 115672118 Aip09g04050 09 146767912 146769381 ECH
Aip02g00193 02 2859416 2861986 Aip07g02941 07 115668241 115672118 ECH
Aip03g03101 03 98322676 98325199 Aip07g02941 07 115668241 115672118 ECH
Aip07g02941 07 115668241 115672118 Aip07g02941 07 115668241 115672118 ECH