Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02932 ATGGCAGCAAAATCGATGGAATTCTCTTATCAAGAACTAGCCAAGGCTACAAATAACTTTAGCTCTGATAACAAAATTGGTCAGAAAGCAGCAATTAAGAAGATGGATGTTCAAGCATCAACAGAGTTTCTTTCAGAGTTGAAGGTCTTAACACATGTTTATCACTTGAATCTGGTGCATTTGATTGGATATTGCGTCGAGGGATCTCTTTCCTTGTGTATGAATACATTGAAAATGGAAACTTAG 246 0.3659 MAAKSMEFSYQELAKATNNFSSDNKIGQKAAIKKMDVQASTEFLSELKVLTHVYHLNLVHLIGYCVEGSLSLCMNTLKMET 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02932 81 Pfam Protein tyrosine and serine/threonine kinase 18 74 IPR001245 GO:0004672|GO:0006468
Aip07g02932 81 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 3 74 IPR044812 GO:0019199|GO:0045087
Aip07g02932 81 SUPERFAMILY Protein kinase-like (PK-like) 5 71 IPR011009 -
Aip07g02932 81 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-LIKE 3 74 - -
Aip07g02932 81 Gene3D Phosphorylase Kinase; domain 1 31 75 - -
Aip07g02932 81 Gene3D Phosphorylase Kinase; domain 1 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02932 Aip-Chr7 115407250 115407730 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02932 4 72 Receptor kinase-like Gene Family AT3G21630 61.446 3.89e-25 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Aip07g02932 PK_Tyr_Ser-Thr 2.7e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02932 - K13429 ccaj:109796409 117.087