Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02925 ATGGCAAATCATGGCGTAGCATCCTTTGACTACACGTATGATGTTTTTCTGAGCTTTCGACGCGGAGTCCACCGCGCGTTCATTGATCATCTCTATAAAGCTTTGGACGGCGTAGATATCAAAATCTTCAAAGACGACGACGAGGAAGAATCGACGACCGAAGAGGAAGAAACCAAGCCGGATCTTCTCGAGAAAATCGTAAGATCCAGAATATCAGTGGTTGTGCTGTGTAAAGACTTTCCATTTTCCACAAGGTGCCTCGATGAAGTTGCCAAGATCATGGAGTGTTATGACAAAAAAACGATGCAGGTTGTGGGACTTTTCTATGACGGCGTGATAGCTGCAGATGTACGTTGGCAGAAGGAAGATAGGGCATATGGCAAAGCCATCACTCAACATAAAGAGAGATTGGGATTGGGAGAAGAATCGGAGAAGATCAAAACATGGCGGTCTGCTTTGTTTAGAGTATGCGAACTCATTGCATTAAATTGCGACAAAAAGTATGAAACTGAGCTTATCAGTATGATTGCTAAAGGCGTCTCTGCTAGATTTCCTCCTTTGCGTTTACAAATCAAAGACGTAGTTGGATTAGATTCTCGTTTTGAGGAGGTGAAATCGCATCTAGATACCGGCAACAATGATGCGGTTCAAATGCTAGCAATTTGTGGAGCTCCTGGCATAGGCAAAACCACATTTGCTGCATATATTTATAATAACATTATTAACAACCAATATATTGCTGCAAGTTTTATATCCAACATCAGAGATAAGCCAAAAGTGGAAGATCTCCAGTCGACGTTGTTATCTGAGATGGGCGAGAAGCGAGAGAGCAGGAGGGGCGATACAGATGGTGGAGGCAGAGAAATCAAACGCAAACTTAGCGTTAAAAAGGTTCTTTTAGTGTTGGATGGTGTTGATAAGATAGAACAGTTGAAATCGCTGGCTGGGGGGTGTGATTGGTTTGGTCCTGGCAGTAAAATTATTATAACAACAAGGGATGCAACTTTGTTGAATAGACATCGTGTTAAAATTAAGAGATATCAAATGACAGAGCTAAGTGATGATGACTCTCACAAACTCTCTTGTTGGTATGCCTTCGATGATAGCGAACCGGCACAAAACTTTGCAAATCTTGTTCCTCAAGCACTAAGTATTGCAAAGGGTGTTCCTTTGGCCTTAAAAAAACTGGGCTCTATATTGAAGGAATGGGAAATGGAATTGGACAGATATAACAAGGTTCCAGAGGCTTTCGAATTTTTGCTCAAATCTTTCGGAAACTGA 1281 0.4176 MANHGVASFDYTYDVFLSFRRGVHRAFIDHLYKALDGVDIKIFKDDDEEESTTEEEETKPDLLEKIVRSRISVVVLCKDFPFSTRCLDEVAKIMECYDKKTMQVVGLFYDGVIAADVRWQKEDRAYGKAITQHKERLGLGEESEKIKTWRSALFRVCELIALNCDKKYETELISMIAKGVSARFPPLRLQIKDVVGLDSRFEEVKSHLDTGNNDAVQMLAICGAPGIGKTTFAAYIYNNIINNQYIAASFISNIRDKPKVEDLQSTLLSEMGEKRESRRGDTDGGGREIKRKLSVKKVLLVLDGVDKIEQLKSLAGGCDWFGPGSKIIITTRDATLLNRHRVKIKRYQMTELSDDDSHKLSCWYAFDDSEPAQNFANLVPQALSIAKGVPLALKKLGSILKEWEMELDRYNKVPEAFEFLLKSFGN 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02925 426 Gene3D - 7 183 IPR035897 -
Aip07g02925 426 Coils Coil 393 413 - -
Aip07g02925 426 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 415 IPR044974 GO:0006952
Aip07g02925 426 Pfam NB-ARC domain 200 412 IPR002182 GO:0043531
Aip07g02925 426 Pfam TIR domain 13 180 IPR000157 GO:0007165
Aip07g02925 426 ProSiteProfiles TIR domain profile. 11 156 IPR000157 GO:0007165
Aip07g02925 426 PRINTS Disease resistance protein signature 218 233 - -
Aip07g02925 426 PRINTS Disease resistance protein signature 386 400 - -
Aip07g02925 426 PRINTS Disease resistance protein signature 292 306 - -
Aip07g02925 426 SMART till_3 12 159 IPR000157 GO:0007165
Aip07g02925 426 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 17 415 - -
Aip07g02925 426 Gene3D - 184 346 IPR027417 -
Aip07g02925 426 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 154 IPR035897 -
Aip07g02925 426 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 411 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02925 Aip-Chr7 115216853 115219725 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02925 195 397 WRKY Transcription Factor Family AT5G45050 30.542 3.44e-16 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02925 - - adu:107462955 757.673