LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip07g02897	ATGAACGCAATCGAGAATTGCAAAATGGCAATAGTGGTGCTGTGTGAGAACTACGCATCTTCAACGTGGTGCCTTGATGAGTTGGTCAAGATCGTTGACTGTCACGAAAAGCAAGGGAAGCAGGTTCTGCCAATTATTTACAGAATGAAACCTTCAGATGTGTGGGAACAGAAGGGTTCCTATGAGATAGCCATGGCTAAACATGAGGATAGATATGAAAAAGACTCTGAGAAGGTCAAAGCATGGCGATTAGCTTTGTCCAAAGTAGGCACGCTAAAGCTAATAAAATGGCTGCATTGCACGGAGATCACGTATGAACCGGAGTTTATCAAGAATATTGTTAGAGACACTGCTGACAGATTACCGTTGCCTGGACCAACCCAGCATGTAGTTGGACTCGATACTTGCTGTGAACAAGTAAAATCAGTGCTAAATATTGAGTCTAATGAAAATATTTGCATGTTGGGAATTTATGGACCTGGTGGAATAGGCAAAACCACATTGGCCAGATGTCTATTCGACAAGATCAAGCGGCAGTTTGAAGCTTCATGTTTTCTCGAAGTAATAGGCTCCCACTTAGGGGGTTTTACAAGTGTGGATAGCTGGGAAGAGGAACTGCACAAGTATAGAATTGATCCAAGTATTCAAGGAGTACTTGAAATAAACTACAATAGCTTGTATGAACTTGATCAGAAAACTTTCTTGGACATTGCTTGTTTCTTCAAAGGAGAGAAATGGGATTATGTTAAAAGGGTATTGAAAGCTTGTGACTTCTATCCAATTGTTCGAGTGTTCATTAGTAAATGTTTAATCACTGTAAATCAGAGTGGTTGCTTGGATATGCATGATCTAGTACAAGACATGGGCAAAGAGATTGTAATGAATGAGTCGCCAACAAACCTGGGTGAACGCAGCAGATTATGGTCTCATAAAGACATTCTTCAAGTACTCAAAGATGACACAGGAAGTAGCTCAATTGAAGGAATAATGCTTCACTCTCCTACACTTGAAGTATTTGAGGATTTGACATGTATCAACCTCTCCCAATGTCAATCCGTTACACATGTCCCGGATATGCCTGGAGCTAAAAGCCTGAGAGTCCTCACACTTGACAAATGCAATAAACTGGTAGGATTTGATGAATCCATTGGATTTATGCCAAACCTTGTGTATTTTAGTGCTTCGGAATGCAGTAAGCTCAAACATTTTGTACCAGAAATGTATTTGCCGTCTCTCGAAGTGCTTTCATTTTACTTTTGTAAAAGCCTTCAAAGTTTCCCAGAAATCATGCAAGAGATGGACAAACCATTAAAGATTAACTTGGCAAATTCTGCAATTGAGGAGTTCCCGAATTCCGTTGGTAATCTTACAGGGCTTGAGCACATAGATATCTCTAAATCCAAAAGACTCCAGTATCTACCAAGTAGCTTCTTGATGTTGCCAAAACTTTTCACATTGACAATAGACGGATGTTCTCTGCTTGGAAGATCATTTAAAAAGTTCAAAGGACACAACAGTCCAAATATAAGGAGACTGAATTTCAGTGGTGCTAATCTTTCAGATGAAGATCTTCATCCAATTCTTCATATTCATCAGAAGTGGGAAGGCATCAATGTATCAAACAATTGTTTTTTATCCCTCCCAAAGTGCATTGAAGGATTTTTGCACTTGAAAATTCTTGACGTGAGTTATTGTAATAATCTTATGATAATTCCAGAACTTCCATCAAGCATTCAAAAAGTAGATGCAAGATATTGCCTATCCTTAACTCCACAGTCCTCAACCATGCCATTGTCCAAGATTTTACAAGAGACTAAAAGAATTGAAGTTGTGATGCCAAAAAAGGAGATTCCCAATTGGCTTGACTACGATTGCAGCAAAGATATTCCTCTGTTTTGGGCTCGGCGAAAGTTCCCTGTTGTTGCTTTAGCATTCATGTTTGGGAGAGCCACTGGCAGTGATATTGATGAGACATTGATGAAGGCTCTAGACTTCTGGCCTCAAATTGCTTCATCCAAATCCTACACTGTTGGTCTCAACTTGTTTATAGAAGGCCAACAAATATTTCCGGAAAAGTCCAAATATTTCAATGTTGGGGAAGATCATGTGTTACTTTTTGATCTTCGAACTTTGTTCAGTGACAAAGAGTGGCATGATCTTGATGCATATATTGGAGATGATTGGAAAGCCATTCATGTTGTATGTGAATCAACCTTAACTCTGAATCATTGGGGAGTTTATGTTTACAAGGGAGAGACAAACATGGATGATATTTATTTCAAGCATCTTCCCAACCACAAATTGTCAAGCGAGTTAGTTCTAGAAAGAAGTCCGCAACAAACTCGGCAAAGAATTGGACAAGTGATAGATAATTTGAATCCAACAGAAACATTTGACAATGAGCATTTGTCTCTTGTTGATCTAGAAGAAGATAGTATGAGTTTTACAAAGGCATTGGTGAGGTCTACAAGATGGCTAAGGCTAACGAAGCTGCTTTGTCTTCTAACTATGGGGCAAGTTTGA	2523	0.3912	MNAIENCKMAIVVLCENYASSTWCLDELVKIVDCHEKQGKQVLPIIYRMKPSDVWEQKGSYEIAMAKHEDRYEKDSEKVKAWRLALSKVGTLKLIKWLHCTEITYEPEFIKNIVRDTADRLPLPGPTQHVVGLDTCCEQVKSVLNIESNENICMLGIYGPGGIGKTTLARCLFDKIKRQFEASCFLEVIGSHLGGFTSVDSWEEELHKYRIDPSIQGVLEINYNSLYELDQKTFLDIACFFKGEKWDYVKRVLKACDFYPIVRVFISKCLITVNQSGCLDMHDLVQDMGKEIVMNESPTNLGERSRLWSHKDILQVLKDDTGSSSIEGIMLHSPTLEVFEDLTCINLSQCQSVTHVPDMPGAKSLRVLTLDKCNKLVGFDESIGFMPNLVYFSASECSKLKHFVPEMYLPSLEVLSFYFCKSLQSFPEIMQEMDKPLKINLANSAIEEFPNSVGNLTGLEHIDISKSKRLQYLPSSFLMLPKLFTLTIDGCSLLGRSFKKFKGHNSPNIRRLNFSGANLSDEDLHPILHIHQKWEGINVSNNCFLSLPKCIEGFLHLKILDVSYCNNLMIIPELPSSIQKVDARYCLSLTPQSSTMPLSKILQETKRIEVVMPKKEIPNWLDYDCSKDIPLFWARRKFPVVALAFMFGRATGSDIDETLMKALDFWPQIASSKSYTVGLNLFIEGQQIFPEKSKYFNVGEDHVLLFDLRTLFSDKEWHDLDAYIGDDWKAIHVVCESTLTLNHWGVYVYKGETNMDDIYFKHLPNHKLSSELVLERSPQQTRQRIGQVIDNLNPTETFDNEHLSLVDLEEDSMSFTKALVRSTRWLRLTKLLCLLTMGQV	840

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip07g02897	840	Gene3D	-	1	117	IPR035897	-
	Aip07g02897	840	PANTHER	RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED	341	772	-	-
	Aip07g02897	840	SUPERFAMILY	L domain-like	281	578	-	-
	Aip07g02897	840	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	114	188	IPR027417	-
	Aip07g02897	840	SMART	till_3	1	92	IPR000157	GO:0007165
	Aip07g02897	840	PRINTS	Disease resistance protein signature	154	169	-	-
	Aip07g02897	840	PRINTS	Disease resistance protein signature	552	568	-	-
	Aip07g02897	840	ProSiteProfiles	TIR domain profile.	1	121	IPR000157	GO:0007165
	Aip07g02897	840	Gene3D	Ribonuclease Inhibitor	270	437	IPR032675	-
	Aip07g02897	840	Gene3D	Ribonuclease Inhibitor	438	610	IPR032675	-
	Aip07g02897	840	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	341	772	IPR044974	GO:0006952
	Aip07g02897	840	PANTHER	RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED	2	186	-	-
	Aip07g02897	840	Gene3D	-	118	228	IPR027417	-
	Aip07g02897	840	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	2	186	IPR044974	GO:0006952
	Aip07g02897	840	SUPERFAMILY	"Winged helix" DNA-binding domain	215	318	IPR036390	-
	Aip07g02897	840	PANTHER	RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED	197	327	-	-
	Aip07g02897	840	Pfam	TIR domain	2	117	IPR000157	GO:0007165
	Aip07g02897	840	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	197	327	IPR044974	GO:0006952
	Aip07g02897	840	SUPERFAMILY	Toll/Interleukin receptor TIR domain	2	90	IPR035897	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip07g02897	Aip-Chr7	115074882	115090670	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aip07g02897	215	642	WRKY Transcription Factor Family	AT4G12020	28.448	1.56e-22	102

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip07g02897	-		-	aip:107607731	970.304