Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02881 ATGAGTTATTTTGCCAACATTTTGAGGAACGATCTTCAAACCAAGAAAATGGACAAGAAGTTATGCCTCTTGTTCATTTTCTCAGCATCAATTTTGTTCATTGTTGGAGCTGAGCCAGTGGAAGATAAACAAGCCTTGCTTGATTTCCTTCACAACATGAACCACCCTTATAATCTCAACTGGAATGAGAATTCTTCTGTATGCACAAGCTGGAGAGGAGTGACATGCAACGCCGGCCGGTCCAGAGTTATCGCACTCCGGTTGCCAGCGGCCGGATTAAGTGGTCAAATCCCAAACAACACTCTTGGTCACCTTTCAGAGCTTCAGATTCTGAGTCTTCATTCAAATGGTATAACTGGTCCTTTCCCTAATGATTTCTCTGAGCTGAAGAACTTAACAAGCCTCTATCTCCAATCCAACAAGATTTCTGGCCCTCTGCCATTGAATTTCTCAGTTTGGAATAGTCTTACAATATTGAATTTATCTAACAACTTTTTCAATGGTACCATACCTTTTTCAATTTCGAATATGACTCATCTCGAATCATTAATCCTTGCCAACAATTCACTTTCTGGTGAAATACCTGATCTCAATATTCCTAGTCTCAAAGAGCTTGATTTGGCAAACAATAATCTTAGTGGTGTTGTTCCTAAATCCCTTCTTAGATTTCCAATTAGGGACTTTGCTGGTAACAATAATCTTACCTATGGAAATGCCCTTTCACCTGCAATTCCCCTGCAACCGCCCAATGATCAACCAGCTAAGAAGAAACACAACAGGATCAGCGAGCAAACGCTGTTGGCTATCATAATTGGTGCTTGTGTGCTTGGATTTGCTGTGGTTGCAGCCTTCATGATTGCGTGCATGTATGAGAAAAGCAACGAAAATGAGCTACCCGTTGAGTCCAAGAAAAAAGAAGTTCCTCTGAAGAAGCAATCTTCTGATAGCCAAGAGTCTCAGGACAAGAACAAGATTGTGTTCTTTGAAGGTTGCAGTCTTGCATTTGACTTAGAGGATCTACTGAGAGCTTCTGCTGAGATTCTAGGAAAGGGGACATTCGGCATGACATATAAGGCTTCTCTAGATGAGAATACCACAGTGGTGGTGAAGAGATTGAAAGAGGTTACAGCTGGAAAAAGAGAATTTGAACAGCAAATGGAAATTGTGGGGAGAATTAAGCATGACAATGTGGATGCATTAAGGGCATATTACTACTCAAAGGAGGAGAAACTCATAGTATATGATTTCTATCAACAAGGCAGCGTTTCTGCATTGTTGCATGGAAAAAGAGGGGAAGGAAGAATCCCTTTAGACTGGGAGAGCCGTCTAAGAATCGCAATAGGCGCAGCAAGAGCCATTGCTCACATCCATGCTCAACACGGAGGGAAACTAGTTCATGGAAACATAAAAGCCTCAAACATCTTCCTCAACTCACAAGGATACGGTTGTGTATCGGACACCGGTTTGGCAACCCTGATGAGTCCATTGCCTGCACCTGCAACACGTGCTGCTGGATACCGTGCCCCAGAAGTAACTGACACCCGAAAATCAACACATGCATCTGATGTCTATGCTTTCGGGGTCCTAGTACTCGAGCTTCTGACAGGGAAGTCACCAGTACCTGCTGCCGGAGGCGAGGAAGTTATGCATTTGGTTAGATGGGTGAATTCTGTGGTCAGAGAAGAATGGACTGCAGAGGTGTTTGATGTGGAGCTTCTGAGGTATCCGAATATAGAGGAAGAAATGGTGGAGATGCTGCAAATAGGGATGGCTTGTGCCTCAAGAATACCGGATCAGAGACCGAACATGACAGAGGTGGTGAGAATGATGGAGGAAATTCGTCGTGTAAACACTGGAAATCCACCTTCCACTGGATCTAGATCAGAAGTTTCTACTCCAACAACTTATGCAGTTGACATGATGGTGGCTTCTACATCGGCAATGTAA 1947 0.434 MSYFANILRNDLQTKKMDKKLCLLFIFSASILFIVGAEPVEDKQALLDFLHNMNHPYNLNWNENSSVCTSWRGVTCNAGRSRVIALRLPAAGLSGQIPNNTLGHLSELQILSLHSNGITGPFPNDFSELKNLTSLYLQSNKISGPLPLNFSVWNSLTILNLSNNFFNGTIPFSISNMTHLESLILANNSLSGEIPDLNIPSLKELDLANNNLSGVVPKSLLRFPIRDFAGNNNLTYGNALSPAIPLQPPNDQPAKKKHNRISEQTLLAIIIGACVLGFAVVAAFMIACMYEKSNENELPVESKKKEVPLKKQSSDSQESQDKNKIVFFEGCSLAFDLEDLLRASAEILGKGTFGMTYKASLDENTTVVVKRLKEVTAGKREFEQQMEIVGRIKHDNVDALRAYYYSKEEKLIVYDFYQQGSVSALLHGKRGEGRIPLDWESRLRIAIGAARAIAHIHAQHGGKLVHGNIKASNIFLNSQGYGCVSDTGLATLMSPLPAPATRAAGYRAPEVTDTRKSTHASDVYAFGVLVLELLTGKSPVPAAGGEEVMHLVRWVNSVVREEWTAEVFDVELLRYPNIEEEMVEMLQIGMACASRIPDQRPNMTEVVRMMEEIRRVNTGNPPSTGSRSEVSTPTTYAVDMMVASTSAM 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02881 648 ProSiteProfiles Leucine-rich repeat profile. 201 222 IPR001611 GO:0005515
Aip07g02881 648 ProSiteProfiles Protein kinase domain profile. 342 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g02881 648 Gene3D Transferase(Phosphotransferase) domain 1 418 625 - -
Aip07g02881 648 Pfam Leucine Rich Repeat 201 221 IPR001611 GO:0005515
Aip07g02881 648 Pfam Leucine Rich Repeat 155 176 IPR001611 GO:0005515
Aip07g02881 648 ProSitePatterns Protein kinases ATP-binding region signature. 348 379 IPR017441 GO:0005524
Aip07g02881 648 PANTHER OS05G0588300 PROTEIN 26 640 - -
Aip07g02881 648 PANTHER LRR RECEPTOR-LIKE KINASE 26 640 - -
Aip07g02881 648 SUPERFAMILY Protein kinase-like (PK-like) 346 611 IPR011009 -
Aip07g02881 648 Gene3D Phosphorylase Kinase; domain 1 308 416 - -
Aip07g02881 648 Pfam Protein tyrosine and serine/threonine kinase 346 609 IPR001245 GO:0004672|GO:0006468
Aip07g02881 648 Pfam Leucine rich repeat N-terminal domain 41 77 IPR013210 -
Aip07g02881 648 Pfam Leucine rich repeat 97 142 IPR001611 GO:0005515
Aip07g02881 648 SUPERFAMILY L domain-like 43 222 - -
Aip07g02881 648 Gene3D Ribonuclease Inhibitor 40 247 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02881 Aip-Chr7 114872228 114875502 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02881 31 634 Receptor kinase-like Gene Family AT4G23740 56.019 0.0 679
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aip07g02881 PK_Tyr_Ser-Thr 1.1e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02881 - - gmx:100809359 915.22