Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02853 ATGAACTATATGTTTATTCTTATTGCCACTTTCAAGATTATAAAGACGAAGATAACGAAGTTACAAGAGGCAATGGGAGTTCCAACATCACACAGCACTAAAAGGATAACACAACCTATTTTCAAAGTAAAAGAAGACGCATCATTAACAGATTCTAACGAACGCACTCTAATTCGTCGAAGGATTCTCATGGATTCCAATAATAATGACACTTGTTCCTTCTCCTTACCCTATGATTCATGGATGGTAAAGCACCCTTCAGCATTGCACTCATTTGATAGATTGATGAAATCAGCAATGGGGAAGAGGATCATTGTTTTCTTAGACTATGATGGCACCTTATCACCAATTGTCAATGATCCTGATCGAGCTTTCATGTCTGATGAGATGCGTGCTGCAGTTCGTGAAGTTGCTACTTATTTTCCAACAGCAATAATTAGTGGAAGAAGCAGAGAAAAGGTAAAAGATTTTGTGAAGTTAAATAATTTATATTATGCTGGGAGCCATGGAATGGACATAATGGCACCATTAATGGCAATTGGATCTTCTAATGCTAGACATTCTGACATGAACCTTAACACAAAAGGCAATGGAGTTCCCTTTCAACCCGCCAAGAAGTTTTTGCCGGCAATTCAACAGATTGTTAGAAGATTAGAGAACGAAGTAAAGGATATAAAAGGTGCAAGGGTAGAGGACAATGGATTCTGCCTCTCTGTACATTTTCGACAAGTTCAAGAACAGGATTATGGTGTTTTGGAGAAGAAAGTGAAATGTGTGCTTGAAGAGAATCCACAATTTCGGTTAACTGAGGGTAAAAAGGTCTTGGAAATAAGACCATCCATAGAATGGAACAAAGGCAATGCTGTTGAGTATTTTCTTGACACTTTAGGCTTAAATTCTTCTACCAATATCCTTCCTCTCTATATTGGAGATGATCGAACTGATGAAGATGCTTTTAAGGTAATAAAGAGAAGAGGGCAAGGGTATCCAATTCTAGTGTCTTCAATTCCAAGAGAAACAAATGCTTTCTACTCTTTGCGTGACCCATCAGAAGTACTAATCTTCTTGACAAAGCTTGCAAAATGGATGAAAAGCTCTTCTATCCCAAAACCATGCCCTTAA 1122 0.3788 MNYMFILIATFKIIKTKITKLQEAMGVPTSHSTKRITQPIFKVKEDASLTDSNERTLIRRRILMDSNNNDTCSFSLPYDSWMVKHPSALHSFDRLMKSAMGKRIIVFLDYDGTLSPIVNDPDRAFMSDEMRAAVREVATYFPTAIISGRSREKVKDFVKLNNLYYAGSHGMDIMAPLMAIGSSNARHSDMNLNTKGNGVPFQPAKKFLPAIQQIVRRLENEVKDIKGARVEDNGFCLSVHFRQVQEQDYGVLEKKVKCVLEENPQFRLTEGKKVLEIRPSIEWNKGNAVEYFLDTLGLNSSTNILPLYIGDDRTDEDAFKVIKRRGQGYPILVSSIPRETNAFYSLRDPSEVLIFLTKLAKWMKSSSIPKPCP 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02853 373 SUPERFAMILY HAD-like 105 363 IPR036412 -
Aip07g02853 373 TIGRFAM T6PP: trehalose-phosphatase 101 360 IPR003337 GO:0003824|GO:0005992
Aip07g02853 373 Gene3D - 202 369 IPR023214 -
Aip07g02853 373 Gene3D - 104 191 IPR023214 -
Aip07g02853 373 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 58 367 IPR044651 GO:0004805|GO:0005992
Aip07g02853 373 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 58 367 - -
Aip07g02853 373 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 105 325 IPR006379 -
Aip07g02853 373 CDD HAD_TPP 106 352 - -
Aip07g02853 373 Pfam Trehalose-phosphatase 107 350 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02853 Aip-Chr7 114285634 114295254 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02853 106 371 Trehalose Biosynthesis Gene Families AT1G60140 25.623 1.90e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02853 K01087 - gmx:100819120 538.88