Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02840 ATGTTATCCCTTTGTTCATTTTTGGTATCCTTTCTACTGCTGCTGGGGATCTTCTTAAACATTTTGGATGTTATTGTTATTATTGATTACCTCGCCGGGTGGAATACCAAGGTGGCAATTGATGCAGACAAAAGAATGTGTTCATCCCGGTGGTGTGGGAGGCATGAGATAAGGTACCCTTTCAGGCTGAATAATAGTAGTCCAAGCCATTGTGGTGATCACAGGTACACCCTCTCCTGCGAGAATGATAACCAACTCTTTCTCTATCTCACATCAATCAAGTTCCAAGTACAGTCAATTAACTACAACAACTACACAATCCGACTAGTAGATTCCAATGTTGCGCTGCATACCCATAATAATCACTCTTCTCTCCTTCCTTATTCTTTAACCTCCTCTAGTTTCAGCAGTGCCAAAGATGAACCATATAATGATCGGTTCTATAACCAGCATCATTTAGTTGATGTTATTAGATTGACAAAGCAGATGGTATATTTGATGAGGTGCCCACCATATGGAGTAAAATCTTCTTCTGCTGCTGCAACTTGCATGAATGGATCTTATGCGCTTGGGAGTACATTATTCTATGTCAGTGATATTGATAAAAGTCTCCAGGATTTGGTGTTCGGAGACTCGTGTCATATAGAGTGGATGTATCTGATTTCATGGCCTGTTGAAATCAAACACAGAAATAATTCATGCACAGACATCCATCGTATGCTGCTCTACGGGTTTGAACTTTCTTGGTTGAAAGTATATTGCAAGTATGAGGCCATCCTCAGTGATAGTAACAAAGTCATTTGTTATGATAAGCCTTCACTACTTATACATACAAGTTTCCTGTACTCAATGTATGTTGAGGCTCTAATGTATGGAACGGTTTTATTTATTCTTGCCAAATTTGCACTTGGAGCTCCATGCATCATTATCTTCTGCATATATAAATGGAGACGAAGGCATTTATCCATATATGACAATATCGAAGATTTTCTGCGAAGTGACAACAACATCATACCAATTAGATACTCCTACAAAGAAATCAGGAACATAACTGAAAAGTTCAAGACTAAACTAGGAAATGGAGGCTATGGCTCTGTCTTCCAAGGAAAACTTCGAAGCGGTCGTCTAGCAGCTGTTAAGGTATTGAATGAGGCCAAATCCAATGGCCAAGAATTCATCAATGAAGTTGCTACTATTGGAAGAATTCACCATGTTAATGTGGTGCAACTCATTGGTTTTTGTGTGGAAGGATCAACGCGTTGTTTGGTATATGAGTTGATGCAGAATGGCTCTTTAGAAAAATACATATTTTCACCTCAAGATAGTGCTTCCTTAAGTTGTGAAAAACTCTATACCATTTCCCTTGGAGTGGCACGTGGTATTGAATACTTGCATAATGGGTGTGACATGAAAATTCTGCACTTTGACATCAAACCTCACAACATTCTTTTGGATGAAAACTTCAATCCAAAAGTCTCTGACTTTGGACTTGCAAGGCTATCTCCCACTGATAAAAGCATTGTGTCTCTGACTGCAGCAAGAGGAACCATAGGGTACATGGCTCCTGAGCTCTTCTACAGAAATGTTGGCGCAATCTCGTACAAAGCTGATGTCTATAGCTTTGGGATGTTGTTAATGGAGATGGCTAGTAGAAGGAAGAATTTGAATGCACAGATTGAAAATTCCAGCCAGATATATTTTCCCTTTTGGGTTTATGATGAATTGCAGGATGGAAGGAAAATAACAATAGAAAATGACACAGATGAAGAGATGAAGTTGGCAAAAAGAATGATGATTGTGGCATTGTGGTGTATACAAACAAGGCCTAATGATCGACCTTCAATGAAGAGAGTTGTGGAGATGCTAGAACAAGACGATGACTTAGAAATGCCTTCAAAACCATACTTCTACCCACTTGATGCACCCACAGAAGACAATGTTGAACATACCACAACTCATAACAGTTCATCACTTTCCTCTGACATCTCGTCAGTTAGTGATTCAAAGGAATAG 2013 0.3924 MLSLCSFLVSFLLLLGIFLNILDVIVIIDYLAGWNTKVAIDADKRMCSSRWCGRHEIRYPFRLNNSSPSHCGDHRYTLSCENDNQLFLYLTSIKFQVQSINYNNYTIRLVDSNVALHTHNNHSSLLPYSLTSSSFSSAKDEPYNDRFYNQHHLVDVIRLTKQMVYLMRCPPYGVKSSSAAATCMNGSYALGSTLFYVSDIDKSLQDLVFGDSCHIEWMYLISWPVEIKHRNNSCTDIHRMLLYGFELSWLKVYCKYEAILSDSNKVICYDKPSLLIHTSFLYSMYVEALMYGTVLFILAKFALGAPCIIIFCIYKWRRRHLSIYDNIEDFLRSDNNIIPIRYSYKEIRNITEKFKTKLGNGGYGSVFQGKLRSGRLAAVKVLNEAKSNGQEFINEVATIGRIHHVNVVQLIGFCVEGSTRCLVYELMQNGSLEKYIFSPQDSASLSCEKLYTISLGVARGIEYLHNGCDMKILHFDIKPHNILLDENFNPKVSDFGLARLSPTDKSIVSLTAARGTIGYMAPELFYRNVGAISYKADVYSFGMLLMEMASRRKNLNAQIENSSQIYFPFWVYDELQDGRKITIENDTDEEMKLAKRMMIVALWCIQTRPNDRPSMKRVVEMLEQDDDLEMPSKPYFYPLDAPTEDNVEHTTTHNSSSLSSDISSVSDSKE 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02840 670 SUPERFAMILY Protein kinase-like (PK-like) 334 623 IPR011009 -
Aip07g02840 670 ProSiteProfiles Protein kinase domain profile. 352 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g02840 670 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 25 258 - -
Aip07g02840 670 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 294 647 - -
Aip07g02840 670 SMART serkin_6 352 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g02840 670 PANTHER RUST RESISTANCE KINASE LR10-RELATED 25 258 IPR045874 GO:0004672
Aip07g02840 670 PANTHER RUST RESISTANCE KINASE LR10-RELATED 294 647 IPR045874 GO:0004672
Aip07g02840 670 Pfam Protein kinase domain 355 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g02840 670 MobiDBLite consensus disorder prediction 632 670 - -
Aip07g02840 670 Gene3D Phosphorylase Kinase; domain 1 332 426 - -
Aip07g02840 670 Gene3D Transferase(Phosphotransferase) domain 1 427 634 - -
Aip07g02840 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Aip07g02840 670 ProSitePatterns Protein kinases ATP-binding region signature. 358 380 IPR017441 GO:0005524
Aip07g02840 670 Pfam Wall-associated receptor kinase galacturonan-binding 47 111 IPR025287 GO:0030247
Aip07g02840 670 MobiDBLite consensus disorder prediction 648 670 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02840 Aip-Chr7 114132577 114135735 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02840 38 634 Receptor kinase-like Gene Family AT5G38260 37.002 2.40e-105 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aip07g02840 Pkinase 1.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02840 - - aip:107605930 1306.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02840 07 114132577 114135735 Aip07g02840 07 114132577 114135735 ECH