Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02838 ATGGCGACGGAGGCATTTATCTGTGTGTTCAAGACAAAACTGGGGAATGGAGGCTACGGTTCTGTCTTTCAAGGAAAACTTCGAAGTAGCCGCCTTGTAGCCGTCAAGTTGTTGAATAAGGCTAAATCCAATGGCCAAGAATTCATCAATGAAGTGGCTACTATTGGTAGAATTCACCATGTCAACATAGTGCAACTTATTGGTTTCTGCGTAGAGGGATCAAAGCGTGCTCTCATATATGAGCTCATGGAAAATGGATCATTAGAAAAATACATATTTTCCCCTCAGAAGAATGATTCCTTAAGTTGTGAAAAACTCTACACCATTTCCCTTGGAGTAGCACGTGGAATTGAATACTTGCATAATGGGTGTGACATGAAAATTCTGCACTTTGACATCAAGCCTCACAATATTCTTTTGGATGAGAACTTCAACCCAAAAGTGTCTGATTTTGGACTTGCAAGACTATCTCCCACTGATAAAAGCATTGTGTCTCTGACTGAAGCAAGAGGAACCATAGGGTACATGGCTCCTGAGCTTTTCTACAGAAATGTTGGCGCAATCTCATACAAAGCCGATGTCTATAGCTTTGGGATGTTGTTAATGGAGATGGCGAGTAGAAGGAAGAATTTGAATGCACAGACTGAAAATTCTAGTCAGATATATTTTCCCTTTTGGATTTATGATGAATTGCAGGATGGAAGGGAAATAACAATAGAAAATGACACAGATGAAGAGATGAAGTTGGCAAAAAGAATGATGATTGTGGCACTGTGGTGTATACAAACAAGGCCTAATGATCGACCTTCAATGAAGAGAGTTGTGGAGATGCTAGAACAAGACGATGACTTAGAAATGCCTCCAAAACCATACTTCTACCCACTTGATGCACTCACAGAAGAGAATGTTGAAGATACTACAACTCATAACAGTTCAAAGTTATCCTCTAGTGACGTCTCTTCAGTTAGTGATTCAAAGGAATAG 984 0.3994 MATEAFICVFKTKLGNGGYGSVFQGKLRSSRLVAVKLLNKAKSNGQEFINEVATIGRIHHVNIVQLIGFCVEGSKRALIYELMENGSLEKYIFSPQKNDSLSCEKLYTISLGVARGIEYLHNGCDMKILHFDIKPHNILLDENFNPKVSDFGLARLSPTDKSIVSLTEARGTIGYMAPELFYRNVGAISYKADVYSFGMLLMEMASRRKNLNAQTENSSQIYFPFWIYDELQDGREITIENDTDEEMKLAKRMMIVALWCIQTRPNDRPSMKRVVEMLEQDDDLEMPPKPYFYPLDALTEENVEDTTTHNSSKLSSSDVSSVSDSKE 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02838 327 MobiDBLite consensus disorder prediction 286 327 - -
Aip07g02838 327 ProSitePatterns Protein kinases ATP-binding region signature. 14 36 IPR017441 GO:0005524
Aip07g02838 327 Gene3D Phosphorylase Kinase; domain 1 8 86 - -
Aip07g02838 327 PANTHER RUST RESISTANCE KINASE LR10-RELATED 9 295 IPR045874 GO:0004672
Aip07g02838 327 MobiDBLite consensus disorder prediction 308 327 - -
Aip07g02838 327 Gene3D Transferase(Phosphotransferase) domain 1 87 290 - -
Aip07g02838 327 ProSiteProfiles Protein kinase domain profile. 8 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g02838 327 SUPERFAMILY Protein kinase-like (PK-like) 11 279 IPR011009 -
Aip07g02838 327 SMART serkin_6 8 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g02838 327 Pfam Protein kinase domain 11 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g02838 327 PIRSF ILK 9 284 - -
Aip07g02838 327 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Aip07g02838 327 PANTHER INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1, PUTATIVE-RELATED 9 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02838 Aip-Chr7 114093263 114094332 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02838 10 306 Receptor kinase-like Gene Family AT5G38280 49.835 1.20e-103 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aip07g02838 Pkinase 7.3e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02838 - - ahf:112704953 593.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02838 07 114093263 114094332 Aip07g02838 07 114093263 114094332 ECH