Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02836 ATGTCATCCGTTGTTGTGTTGTTGTTATCGTGCCTGTGCTTGTTCATCACCACGCTCTACACCATTTCCCTTGGAGTAGCACGTGGAATTGAATACTTGCATAATGGGTGTGACATGAAAATTCTGCACTTTGACATCAAGCCTCACAATATTCTTTTGGATGAGAACTTCAACCCAAAAGTCTCTGATTTTGGACTTGCAAGGCTATCTCCCACTGATAAAAGCATTGTGTCTCTGACTGCAGCAAGAGGAACCATAGGGTACATGGCTCCTGAGCTTTTCTACAGAAATGTTGGCGCAATCTCATACAAAGCCGATGTCTATAGCTTTGGGATGTTGTTAATGGAGATGGCTAGTAGAAGGAAGAATTTGAATGCACAGACTGAAAATTCCAGCCAAATATATTTTCCCTTCTGGGTTTATGATGAATTGCAGGATGGAAGGGAAATAACAATAGAAAATGACACAGATGAAGAGATGAAGTTGGCAAAAAGAATGATGATTGTGGCATTGTGGTGTATACAAACAAGGCCTAATGATCGACCTTCAATGAAGAGAGTTGTGGAGATGCTAGAACAAGATGATGACTTAGAAATGCCTCCAAAACCGTACTTCTACCCACTTGATGCACTCACAGAAGAGAATGTTGAAGATACTACAACTCATAACAGTTCAAAGTTATCCTTTGGTGACATCTCTTCAGTTAGTGATTCAAAGGAATAG 723 0.4039 MSSVVVLLLSCLCLFITTLYTISLGVARGIEYLHNGCDMKILHFDIKPHNILLDENFNPKVSDFGLARLSPTDKSIVSLTAARGTIGYMAPELFYRNVGAISYKADVYSFGMLLMEMASRRKNLNAQTENSSQIYFPFWVYDELQDGREITIENDTDEEMKLAKRMMIVALWCIQTRPNDRPSMKRVVEMLEQDDDLEMPPKPYFYPLDALTEENVEDTTTHNSSKLSFGDISSVSDSKE 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02836 240 Gene3D Transferase(Phosphotransferase) domain 1 13 203 - -
Aip07g02836 240 SUPERFAMILY Protein kinase-like (PK-like) 18 192 IPR011009 -
Aip07g02836 240 MobiDBLite consensus disorder prediction 221 240 - -
Aip07g02836 240 ProSitePatterns Serine/Threonine protein kinases active-site signature. 41 53 IPR008271 GO:0004672|GO:0006468
Aip07g02836 240 PANTHER INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1, PUTATIVE-RELATED 15 208 - -
Aip07g02836 240 Pfam Protein kinase domain 21 189 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g02836 240 ProSiteProfiles Protein kinase domain profile. 1 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g02836 240 PANTHER RUST RESISTANCE KINASE LR10-RELATED 15 208 IPR045874 GO:0004672
Aip07g02836 240 MobiDBLite consensus disorder prediction 215 240 - -
Aip07g02836 240 SMART serkin_6 1 191 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02836 Aip-Chr7 114070141 114070863 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02836 16 203 Receptor kinase-like Gene Family AT5G39030 56.995 5.10e-70 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aip07g02836 Pkinase 3.3e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02836 - - aip:107607710 471.085