Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02834 ATGTCATCCGTTGTTGTGTTGTTGTTATCGTGCCTGTGCTTGTTTGCTACTATTGGTAGAATTCACCATGTCAACATAGTGCAACTTATTGGTTTCTGCGTAGAGGGATCAAAGCGTGCTCTCATATATGAGCTCATGGAAAATGGATCATTAGAAAAATACATATTTTCCCCTCAGAAGAATGATTCCTTAAGTTGTGAAAAACTCTACACCATTTCCCTTGGAGTAGCACGTGGAATTGAATACTTGCATAATGGGTGTGACATGAAAATTCTGCACTTTGACATCAAGCCTCACAATATTCTTTTGGATGAGAACTTCAACCCAAAAGTGTCTGATTTTGGACTTGCAAGGCTATCTCCCACTGATAAAAGCATTGTGTCTATGACTGCAGCAAGAGGAACCATAGGGTACATGGCTCCTGAGCTCTTCTATAGAAATGTTGGCGCAATCTCATACAAAGCCGATGTCTATAGCTTTGGGATGTTGTTAATGGAGATGGCTAGTAGAAGGAAGAATTTGAATGCACAGACTGAAAATTCCAGCCAAATATATTTTCCTTTCTGGGTTTATGATGAATTGCAGGATGGAAGGGAAATAACAATAGAAAATGACACAGATGAAGAGATGAAGTTGGCAAAAAGAATGATGATTGTGGCATTGTGGTGTATACAAACAAGGCCTAATGATCGACCTTCAATGAAGAGAGTTGTGGAGATGCTAGAACAAGATGATGACTTAGAAATGCCTCCAAAACCGTACTTCTACCCACTTGATGCACTCACAGAAGAGAATGTTGAAGATACTACTACTCATAACAGTTCAAAGTTATCCTCTGGTGACGTCTCTTCAGTTAGTGATTCAAAGGAATAG 873 0.394 MSSVVVLLLSCLCLFATIGRIHHVNIVQLIGFCVEGSKRALIYELMENGSLEKYIFSPQKNDSLSCEKLYTISLGVARGIEYLHNGCDMKILHFDIKPHNILLDENFNPKVSDFGLARLSPTDKSIVSMTAARGTIGYMAPELFYRNVGAISYKADVYSFGMLLMEMASRRKNLNAQTENSSQIYFPFWVYDELQDGREITIENDTDEEMKLAKRMMIVALWCIQTRPNDRPSMKRVVEMLEQDDDLEMPPKPYFYPLDALTEENVEDTTTHNSSKLSSGDVSSVSDSKE 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02834 290 ProSiteProfiles Protein kinase domain profile. 1 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g02834 290 Pfam Protein kinase domain 18 239 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g02834 290 SMART serkin_6 1 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g02834 290 PANTHER INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1, PUTATIVE-RELATED 16 258 - -
Aip07g02834 290 PIRSF TyrPK_CSF1-R 44 290 - -
Aip07g02834 290 PIRSF TyrPK_CSF1-R 6 60 - -
Aip07g02834 290 Gene3D Transferase(Phosphotransferase) domain 1 47 253 - -
Aip07g02834 290 MobiDBLite consensus disorder prediction 271 290 - -
Aip07g02834 290 MobiDBLite consensus disorder prediction 249 290 - -
Aip07g02834 290 SUPERFAMILY Protein kinase-like (PK-like) 18 242 IPR011009 -
Aip07g02834 290 Gene3D Phosphorylase Kinase; domain 1 13 46 - -
Aip07g02834 290 ProSitePatterns Serine/Threonine protein kinases active-site signature. 91 103 IPR008271 GO:0004672|GO:0006468
Aip07g02834 290 PANTHER RUST RESISTANCE KINASE LR10-RELATED 16 258 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02834 Aip-Chr7 114029177 114030049 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02834 16 269 Receptor kinase-like Gene Family AT5G38280 49.421 8.88e-87 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aip07g02834 Pkinase 1.5e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02834 - - ahf:112704953 517.694