Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02833 ATGCTAGTTGAGGAGGGTGATGACTATCACTTCTTCAACTGTTCACCAGTGGCAATGGATACATATATAAACAATAACATCATGATTCCATGCCTAAGCAGCTCAACCAGTCAAGTATATGCCATTTCATCTTGGAATTCTATCCATGACCTGACAACCCTGTTTCCTTGCACCAAAATGTTCAATATTTCATCCCTCCCAGATGCACTTGTTCCAGCTCTGAAAGATACTCTTGTTTTGTTTTGGTCTGAACCAAGCTGTCAACAATGTGAATCGAAGGGGAAAAGGTGCAGCTGGAACAACAGCACCAAGAATCAACTTGATTGTCTTGTTAATGTCATCCACAAGGATTCATCAACAGCTCTAGTAACCACAATAGGATCAGTACTTGGATCGTTTTTGCTTGTCCTACTGACCGGAGCGATTTATTACATCTATGACTCTTGCATAATGCAAAAGGAAAAACAAGCAATTATTGAAAAATTTCTTGAAGATTACAGGGCTCAAAAACCAACCAGATATTCTTATACCGAAATCAAGAGAATCACCAACAACTTTGGGTACAAGTTAGGAGAGGGCGCCTATGGAACTGTCTTCAAAGGAAGCATCTCAAAAGAATTTCCTATTGCAGTGAAAATGCTGAATAATTCCCAGGGGAAAGGGGAGGAGTTTGTCAATGAAGCTGGTATAATTGGTAGAATCCACCATGTCAATATTGTCAGGTTGGTTGGTTTCTGTGCTGATGGGTTCAGAAGAGCTCTTGTCTATGAATTCTTGCCGAATTCTTCACTGCAGAAGTTCATAAATTTGCCCGACAACAAGCAAAACTTTTTGGGCTGGAAGAAGTTGCAAGAGATTGCTCTAGGTGTAGCTAAAGGAATTGAGTATCTTCACCAAGGTTGTGATCAACGCATTCTCCATTTTGATATCAAACCTCAAAATGTGTTGCTAGATCACAACGTTACTCCAAAAATTTGTGATTTCGGTCTAGCTAAATTATGCTCCAAGGATCAAAGTGTAGTGTCAATGACAGCAGCTAGAGGAACTTTGGGGTACATTGCGCCCGAAGTTTTCTCAAGGAACTTTGGAAATGTATCTTACAAGTCTGATGTTTACAGTTATGGAATGATGCTGCTAGAAACAATTGGAGGGAAGAAGATCACAGAGGATATAGAAGAAAACAGTAGCCATGTTTACTATCCAGAATGGATGCATAGTATTTTAGAAGAGACTGATGAAATCAGAATTCATATTGAAGATGAAGAAGATGCTAAAATTGCTAAGAAACTAGCAACAGTGGGACTTTGGTGCATCCAATGGCATGCAGTGGATCGACCATCAATGCAGACAGTGCTTCAAATGTTGGAGGGAGACCAAGACACAATACCAAATCCTCCTAATCCTTTTGCTTCCACAGGGCCTTCAAGAAAATATGCTAAAATTAGTGTGCCTGCAAGACAAATTACCCAAGATTTAGAAGTGATCCAAGAGTTAGATTAA 1500 0.3973 MLVEEGDDYHFFNCSPVAMDTYINNNIMIPCLSSSTSQVYAISSWNSIHDLTTLFPCTKMFNISSLPDALVPALKDTLVLFWSEPSCQQCESKGKRCSWNNSTKNQLDCLVNVIHKDSSTALVTTIGSVLGSFLLVLLTGAIYYIYDSCIMQKEKQAIIEKFLEDYRAQKPTRYSYTEIKRITNNFGYKLGEGAYGTVFKGSISKEFPIAVKMLNNSQGKGEEFVNEAGIIGRIHHVNIVRLVGFCADGFRRALVYEFLPNSSLQKFINLPDNKQNFLGWKKLQEIALGVAKGIEYLHQGCDQRILHFDIKPQNVLLDHNVTPKICDFGLAKLCSKDQSVVSMTAARGTLGYIAPEVFSRNFGNVSYKSDVYSYGMMLLETIGGKKITEDIEENSSHVYYPEWMHSILEETDEIRIHIEDEEDAKIAKKLATVGLWCIQWHAVDRPSMQTVLQMLEGDQDTIPNPPNPFASTGPSRKYAKISVPARQITQDLEVIQELD 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02833 499 ProSitePatterns Protein kinases ATP-binding region signature. 190 212 IPR017441 GO:0005524
Aip07g02833 499 ProSiteProfiles Protein kinase domain profile. 184 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g02833 499 ProSitePatterns Serine/Threonine protein kinases active-site signature. 305 317 IPR008271 GO:0004672|GO:0006468
Aip07g02833 499 PANTHER RECEPTOR-LIKE KINASE 9 498 - -
Aip07g02833 499 Gene3D Phosphorylase Kinase; domain 1 157 258 - -
Aip07g02833 499 SMART serkin_6 184 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g02833 499 Gene3D Transferase(Phosphotransferase) domain 1 259 464 - -
Aip07g02833 499 SUPERFAMILY Protein kinase-like (PK-like) 167 456 IPR011009 -
Aip07g02833 499 Pfam Protein kinase domain 188 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g02833 499 PANTHER RUST RESISTANCE KINASE LR10-RELATED 9 498 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02833 Aip-Chr7 114025981 114028017 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02833 58 494 Receptor kinase-like Gene Family AT1G66910 40.393 4.31e-106 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aip07g02833 Pkinase 1.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02833 - - mtr:MTR_1g031540 658.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02833 07 114025981 114028017 Aip07g02833 07 114025981 114028017 ECH