Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02829 ATGTGTTCATCTGGGTGGTGTGGGAGGCATGACATAAGGCACCCTTTCAGGCTGAATAATAGTACTCCAAGCCCCTGTGGTGACCTCAGGTACACCCTCTCTTGCGAGAATGATAACCAACTCTTTCTCTATCTCAAATCAATCAAGCTCAAAGTGCACTCAATTAACTACAACAACTACACAATCCGACTAGTAGATTCCAATGTTGCCCTGCATAGTCATGATCACTCTTACCCCCTTCCTTGTTCTTTAACCTCCTACAACTTCACCCGCGCCCAAGATGAACTATATCAAGATCGCTTCTATACACAGCATCATTCTATTGAAGTTATTAGATTGACAAAGCAGATGTTATATTTGGTGAGGTGTCCACCATATGGAGTTGAATCTTCTGCTGCTGCTGAAACTTGCATGAATAATGGATCATCCTATGTGCTTGGGAGTACATTCTATGTCAGTGATCTTGACAAGCGTCTCCAGGATTTGGCATTCGGAGACTCGTGTCATATAGAGTGGATGTATGTGACTTCATGGCCTACTGAAATCAAACACAGCAATATTTCATACTCAGACATCCATCATATGCTGCTCTATGGGTTTGAACTTTCTTGGTTGAAAGGATATTGCAATAACGAGACATTATTTGCCATGCTCGCTGATCATCATAACAACATCATTTGTTTTAACAATTATTACCAAAGCTCCCCACTTCAAAATTTCCTATTCTCAATGTATGTTGTGGTTCTAAGGGCTGGAACGATTTTATTTGTTCCTGCCAAATTTTCACTTGGAGCTCCATGCATCATTATCTTCTGCATATATAAATGGAGACGAAGGCATTTATCCATATATGACAGTATCGAAGATTTTCTGCGAAGCGACAATAACATTATGCCAATTAGATACTCCTACAAAGAAATCAAGAACATAACTGGAAAGTTCAAGACTAAACTAGGAAATGGAGGCTATGGCTCTGTCTTCCAAGGAAAACTTCGAAGCTGTCGTCTAGCAGCAGTCAAGGTATTGAATGAGGCCAAATCCAATGGCCAAGAATTCATCAATGAAGTTGCTACTATTGGAAGAATTCACCATGTTAATGTGGTGCAACTCATTGGTTTCTGTGTAGAGGGATCAAAGCGTGCTCTCATATACGAGTTGATGGAAAATGGATCACTAGAAAAATACATATTTTCCCCTCAAGACAAGGCTTCCTTAAGTTGTGAAGAGCTCCACACCATTTCCCTTGGAGTAGCACATGGTACTGAATACTTGCATAATGGGTGTGACATGAAAATTCTGCACTTTGACATCAAGCCTCACAACATTCTTTTGGATGAGAACTTCAATCCAAAAGTCTCTGACTTTGGACTTGCAAGGCTATCTCCCACTGATAAAAGCATTGTGTCTATGACTGCAGCAAGAGGAACCATAGGATACATGGCTCCTGAGCTCTTCTACAGAAATGTTAGGCGCAATCTCGTACAAAGCTGA 1491 0.4078 MCSSGWCGRHDIRHPFRLNNSTPSPCGDLRYTLSCENDNQLFLYLKSIKLKVHSINYNNYTIRLVDSNVALHSHDHSYPLPCSLTSYNFTRAQDELYQDRFYTQHHSIEVIRLTKQMLYLVRCPPYGVESSAAAETCMNNGSSYVLGSTFYVSDLDKRLQDLAFGDSCHIEWMYVTSWPTEIKHSNISYSDIHHMLLYGFELSWLKGYCNNETLFAMLADHHNNIICFNNYYQSSPLQNFLFSMYVVVLRAGTILFVPAKFSLGAPCIIIFCIYKWRRRHLSIYDSIEDFLRSDNNIMPIRYSYKEIKNITGKFKTKLGNGGYGSVFQGKLRSCRLAAVKVLNEAKSNGQEFINEVATIGRIHHVNVVQLIGFCVEGSKRALIYELMENGSLEKYIFSPQDKASLSCEELHTISLGVAHGTEYLHNGCDMKILHFDIKPHNILLDENFNPKVSDFGLARLSPTDKSIVSMTAARGTIGYMAPELFYRNVRRNLVQS 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02829 496 Pfam Protein kinase domain 315 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g02829 496 PANTHER SERINE/THREONINE KINASE, PUTATIVE-RELATED 8 490 - -
Aip07g02829 496 ProSiteProfiles Protein kinase domain profile. 312 496 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g02829 496 ProSitePatterns Serine/Threonine protein kinases active-site signature. 432 444 IPR008271 GO:0004672|GO:0006468
Aip07g02829 496 Gene3D Phosphorylase Kinase; domain 1 291 386 - -
Aip07g02829 496 Gene3D Transferase(Phosphotransferase) domain 1 387 492 - -
Aip07g02829 496 PANTHER RUST RESISTANCE KINASE LR10-RELATED 8 490 IPR045874 GO:0004672
Aip07g02829 496 SMART serkin_6 312 495 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g02829 496 SUPERFAMILY Protein kinase-like (PK-like) 293 488 IPR011009 -
Aip07g02829 496 ProSitePatterns Protein kinases ATP-binding region signature. 318 340 IPR017441 GO:0005524
Aip07g02829 496 Pfam Wall-associated receptor kinase galacturonan-binding 2 66 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02829 Aip-Chr7 113985309 113987586 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02829 259 487 Receptor kinase-like Gene Family AT1G66910 47.458 1.10e-66 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aip07g02829 Pkinase 1.3e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02829 - - aip:107607706 1016.14